RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 BCL2P10415 239 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 CTSEP14091 401 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ATP6V0CP27449 155 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 PPP1CCP36873 323 aaKnown RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 OR3A1P47881 315 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 TNFSF10P50591 281 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ELLP55199 621 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 RAB11AP62491 216 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ACY1Q03154 408 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 TMEM187Q14656 261 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 TMEM241Q24JQ0 296 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 HYAL4Q2M3T9 481 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 MPV17LQ2QL34 196 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 H1FNTQ75WM6 255 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 ABHD12BQ7Z5M8 362 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 MARCH3Q86UD3 253 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ZNF695Q8IW36 515 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ZNF664Q8N3J9 261 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ZFP62Q8NB50 900 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 NAXEQ8NCW5 288 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 DOK4Q8TEW6 326 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 PTPMT1Q8WUK0 201 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 TMEM170AQ8WVE7 144 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ST8SIA1Q92185 356 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 DAZLQ92904 295 aaKnown RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 SARAFQ96BY9 339 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ADAT3Q96EY9 351 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 BSCL2Q96G97 398 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 TGM7Q96PF1 710 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 IMMP2LQ96T52 175 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ATP5SQ99766 215 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 RARRES2Q99969 163 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 LRRC61Q9BV99 259 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 ZNF286AQ9HBT8 521 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 SDF2L1Q9HCN8 221 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 CHST11Q9NPF2 352 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 GPR173Q9NS66 373 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 LYRM2Q9NU23 88 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 FKBP11Q9NYL4 201 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 SLC7A11Q9UPY5 501 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 MMACHCQ9Y4U1 282 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 SPAG17Q6Q759 2223 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 LAMA1P25391 3075 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 PCDH15Q96QU1 1955 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 LRP5LA4QPB2 252 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 MAP1LC3B2A6NCE7 125 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FAM90A18PA6NE21 464 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FAM90A16PA6NEW6 464 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 TMEM210A6NLX4 147 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FAM90A9PA6NNJ1 464 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 C4orf47A7E2U8 309 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FAM90A5PA8MXJ8 464 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 C17orf105B2RV13 164 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 H0YL77 283 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 TP53I11O14683 189 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 MGST3O14880 152 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 HCRTR1O43613 425 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 RAD51DO75771 328 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 NUDT3O95989 172 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 AMBPP02760 352 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FAM90A15PP0C7V4 464 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FAM90A14PP0C7W9 464 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 ZNF883P0CG24 379 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 PGA4P0DJD7 388 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 PGA5P0DJD9 388 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 CCL1P22362 96 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FKBP2P26885 142 aaKnown RBP5.64□□□□□ -1.51
USP28-202ENST00000535607 G0S2P27469 103 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 EPHA8P29322 1005 aaPredicted RBP5.64□□□□□ -1.51
USP28-202ENST00000535607 GALR1P47211 349 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 OR3A4PP47883 348 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FASLGP48023 281 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 TDGF1P3P51864 188 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 PAFAH1B2P68402 229 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 HBG1P69891 147 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 HBG2P69892 147 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 LCN2P80188 198 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 SERF2P84101 59 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 TLE3Q04726 772 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 RAB35Q15286 201 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 TMEM183BQ1AE95 376 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 SAPCD1Q5SSQ6 148 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 NCR3LG1Q68D85 454 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 ZNF343Q6P1L6 599 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 SPSB3Q6PJ21 355 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 ZNF66Q6ZN08 573 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 UEVLDQ8IX04 471 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 ZNF100Q8IYN0 542 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 GATSQ8NAP1 163 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 BHLHE23Q8NDY6 225 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 NOXO1Q8NFA2 376 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 OR4D5Q8NGN0 318 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 OR1N1Q8NGS0 311 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 OR4X1Q8NH49 305 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 OR2V1Q8NHB1 315 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FLVCR1-AS1Q8TAF5 88 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 OR51E1Q8TCB6 317 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 NPIPB3Q92617 1050 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms