RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	OR2T8	A6NH00	312 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CHST1	O43916	411 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	APOBEC3A	P31941	199 aa	Predicted RBP	13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TPPP2	P59282	170 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	LSM11	P83369	360 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	OR4X1	Q8NH49	305 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	MPC2	O95563	127 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ORM1	P02763	201 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ADRB1	P08588	477 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	NAT2	P11245	290 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	HTR1D	P28221	377 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	C4orf17	Q53FE4	359 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SLC2A9	Q9NRM0	540 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TDRD15	B5MCY1	1934 aa	Known RBP	13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	HAX1	O00165	279 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CTDSPL	O15194	276 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	APELA	P0DMC3	54 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532		Q6ZT83	130 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SLC24A4	Q8NFF2	622 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM103A1	Q9BTL3	118 aa	Known RBP	13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	RHOF	Q9HBH0	211 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	LOC102723971	A0A1B0GUV8	181 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	HPRT1	P00492	218 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TPRX1	Q8N7U7	411 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	OR51B2	Q9Y5P1	312 aa		13.64	□□□□□ -0.23
NCAPD3-213	ENST00000534532	HSBP1	O75506	76 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	G6PC	P35575	357 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TIMM23B	Q5SRD1	257 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PCSK4	Q6UW60	755 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	MRGPRF	Q96AM1	343 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CYB5R1	Q9UHQ9	305 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	MIDN	Q504T8	468 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	DCAF12L2	Q5VW00	463 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM57A	Q8TBR7	257 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	KLF14	Q8TD94	323 aa	Predicted RBP	13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	GPX7	Q96SL4	187 aa	Predicted RBP	13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ATAD5	Q96QE3	1844 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TRAV8-7	A0A075B6U6	113 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZNF737	O75373	536 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	C10orf113	Q5VZT2	155 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PKIB	Q9C010	78 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532		A0A1W2PS18	150 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CTSB	P07858	339 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CLEC18B	Q6UXF7	455 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZNF429	Q86V71	674 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZPLD1	Q8TCW7	415 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	WSB1	Q9Y6I7	421 aa		13.63	□□□□□ -0.23
NCAPD3-213	ENST00000534532	P2RY1	P47900	373 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	GUK1	Q16774	197 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ANKRD55	Q3KP44	614 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	C11orf42	Q8N5U0	333 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	NOL4L	Q96MY1	436 aa	Predicted RBP	13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	GHITM	Q9H3K2	345 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	WASHC3	Q9Y3C0	194 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532		A0A1B0GU03	582 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TRIM77	I1YAP6	450 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM78B	Q5VT40	261 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SRXN1	Q9BYN0	137 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	DOCK5	Q9H7D0	1870 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	HBZ	P02008	142 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SPCS3	P61009	180 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZNF826P	Q6ZT77	177 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	FAM222B	Q8WU58	562 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ABHD1	Q96SE0	405 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SCN10A	Q9Y5Y9	1956 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532		J3QW42	95 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ARF6	P62330	175 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	C10orf111	Q8N326	155 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	BVES	Q8NE79	360 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PTX4	Q96A99	478 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CTHRC1	Q96CG8	243 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	VWCE	Q96DN2	955 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	DLEC1	Q9Y238	1755 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TAF1L	Q8IZX4	1826 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	OR2H2	O95918	312 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	LIPF	P07098	398 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	EBLN2	Q6P2I7	272 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SEZ6L2	Q6UXD5	910 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	MMD2	Q8IY49	270 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	NUP37	Q8NFH4	326 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ARL2-SNX15	V9GYD0	113 aa		13.62	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CDS2	O95674	445 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PCM1	Q15154	2024 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	IZUMO4	Q1ZYL8	232 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TMEM241	Q24JQ0	296 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	UNQ5815/PRO19632	Q6UWF5	114 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SLC2A8	Q9NY64	477 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	METTL1	Q9UBP6	276 aa	Known RBP	13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	UFC1	Q9Y3C8	167 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CYB5R3	P00387	301 aa	Predicted RBP	13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	GZMM	P51124	257 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZNF680	Q8NEM1	530 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	SIGLEC12	Q96PQ1	595 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ZNF426	Q9BUY5	554 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TMPRSS5	Q9H3S3	457 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	TNFSF10	P50591	281 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	ST3GAL2	Q16842	350 aa		13.61	□□□□□ -0.23
NCAPD3-213	ENST00000534532	LAMTOR1	Q6IAA8	161 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms