RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 OR10AD1Q8NGE0 317 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 LINC00476Q8WZB0 136 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 SNAPC3Q92966 411 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 EMG1Q92979 244 aaKnown RBP4.8□□□□□ -1.64
CHKA-208ENST00000533910 CYYR1Q96J86 154 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 FYTTD1Q96QD9 318 aaKnown RBP4.8□□□□□ -1.64
CHKA-208ENST00000533910 MICU1Q9BPX6 476 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 TLNRD1Q9H1K6 362 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 PLK3Q9H4B4 646 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 IFT46Q9NQC8 304 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 MTCH1Q9NZJ7 389 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 RCC2Q9P258 522 aaKnown RBP4.8□□□□□ -1.64
CHKA-208ENST00000533910 ST3GAL6Q9Y274 331 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 ALG5Q9Y673 324 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 USP24Q9UPU5 2620 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 CADP27708 2225 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 ACACBO00763 2458 aa4.8□□□□□ -1.64
CHKA-208ENST00000533910 IGLV3-9A0A075B6K5 115 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 TRGV8A0A0C4DH27 118 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 CEACAM18A8MTB9 384 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 ATP6V1G2-DDX39BF2Z307 99 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 F8VVB4 439 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 F8VWA3 439 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 TRAPPC2LH3BP13 241 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 M0R1B8 84 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 GEMIN2O14893 280 aaKnown RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 TIMM8AO60220 97 aaPredicted RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 PRAF2O60831 178 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 NOS1APO75052 506 aaPredicted RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 RAB3DO95716 219 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 DHFRP00374 187 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 IGHV3-13P01766 116 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 CRYAAP02489 173 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 ACAA1P09110 424 aaPredicted RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 PGA5P0DJD9 388 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 DTYMKP23919 212 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 GABRR1P24046 479 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 MC5RP33032 325 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 CD200P41217 278 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 NPBWR2P48146 333 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 MFAP4P55083 255 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 ERVK11-1P61568 191 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 POLR2GP62487 172 aaKnown RBP eCLIP4.79□□□□□ -1.64
CHKA-208ENST00000533910 CD300CQ08708 224 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 ZNF154Q13106 437 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 OR8G1Q15617 311 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 USF2Q15853 346 aaPredicted RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 TAF9Q16594 264 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 RNASE10Q5GAN6 216 aaKnown RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 TMEM65Q6PI78 240 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 ZNF782Q6ZMW2 699 aaPredicted RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 C6orf201Q7Z4U5 140 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 Q8IYB0 196 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 GVQW1Q8N7I0 195 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 TMEM116Q8NCL8 245 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 OR4S1Q8NGB4 309 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 OR51S1Q8NGJ8 323 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 OR6F1Q8NGZ6 308 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 OR8S1Q8NH09 359 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 MED30Q96HR3 178 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 PRRT1Q99946 306 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 NRIP2Q9BQI9 281 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 SLC25A21Q9BQT8 299 aaPredicted RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 SULT4A1Q9BR01 284 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 CHST6Q9GZX3 395 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 HES4Q9HCC6 221 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 MYOZ1Q9NP98 299 aaPredicted RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 TMEM100Q9NV29 134 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 MCUBQ9NWR8 336 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 ZNF581Q9P0T4 197 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 POLDIP2Q9Y2S7 368 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 ANKHD1Q8IWZ3 2542 aaKnown RBP4.79□□□□□ -1.64
CHKA-208ENST00000533910 NBEAQ8NFP9 2946 aa4.79□□□□□ -1.64
CHKA-208ENST00000533910 TANC2Q9HCD6 1990 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 DISC1C4P0D8 188 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 H0YL77 283 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 ARPC1BO15143 372 aaKnown RBP4.78□□□□□ -1.64
CHKA-208ENST00000533910 OR7C1O76099 320 aaPredicted RBP4.78□□□□□ -1.64
CHKA-208ENST00000533910 IL5P05113 134 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 FCGR3AP08637 254 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 NHLRC4P0CG21 123 aaPredicted RBP4.78□□□□□ -1.64
CHKA-208ENST00000533910 FUT3P21217 361 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 CHRNB4P30926 498 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 HRH1P35367 487 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 KLF3P57682 345 aaPredicted RBP4.78□□□□□ -1.64
CHKA-208ENST00000533910 RAB25P57735 213 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 TAS2R46P59540 309 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 RRAS2P62070 204 aaPredicted RBP4.78□□□□□ -1.64
CHKA-208ENST00000533910 ADORA2A-AS1P86434 159 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 MZT1Q08AG7 82 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 ARFRP1Q13795 201 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 LY6DQ14210 128 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 CARTPTQ16568 116 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 MICBQ29980 383 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 IGSF11Q5DX21 431 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 SPIN3Q5JUX0 258 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 SAPCD1Q5SSQ6 148 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 OR52W1Q6IF63 320 aa4.78□□□□□ -1.64
CHKA-208ENST00000533910 GLDNQ6ZMI3 551 aaPredicted RBP4.78□□□□□ -1.64
CHKA-208ENST00000533910 Q6ZPA2 131 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms