RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 C6orf201Q7Z4U5 140 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 LINC00596Q86U02 117 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 GCSAMQ8N6F7 178 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 C19orf18Q8NEA5 215 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 GPX8Q8TED1 209 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 ST8SIA4Q92187 359 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 TBX15Q96SF7 602 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAAP24Q9BTP7 215 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 KRTAP17-1Q9BYP8 105 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 SCPEP1Q9HB40 452 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 LRRC30A6NM36 301 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 C3orf84H3BNL1 204 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 SSX5O60225 188 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 CYB5R3P00387 301 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 IRF2P14316 349 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 MMP9P14780 707 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 INPP1P49441 399 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 NPY4RP50391 375 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 GNG2P59768 71 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 ARFRP1Q13795 201 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 ZNF146Q15072 292 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM201AQ5SY85 155 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 ZNF57Q68EA5 555 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 C11orf44Q8N8P7 122 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR4F17Q8NGA8 305 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR5T2Q8NGG2 359 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 NUDCD2Q8WVJ2 157 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 TRIM63Q969Q1 353 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR4F4Q96R69 305 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 SULT4A1Q9BR01 284 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 KLK11Q9UBX7 282 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 MTFP1Q9UDX5 166 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR14J1Q9UGF5 321 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 GLS2Q9UI32 602 aa9.22□□□□□ -0.93
TRAPPC4-213ENST00000533149 IGHV3OR15-7A0A075B7D8 119 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 TRAV24A0A0B4J272 114 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 UBE2QL1A1L167 161 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 MEIS3P1A6NDR6 274 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 RFPL4AA6NLU0 287 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 SERPINE3A8MV23 424 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 C22orf46C9J442 243 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 RFPL4AL1F8VTS6 287 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 CA11O75493 328 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF205O95201 554 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 OR2H2O95918 312 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 HAND1O96004 215 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 GLAP06280 429 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 LPLP06858 475 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 FBP1P09467 338 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 GSTT2BP0CG30 244 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF44P15621 663 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 PRDX2P32119 198 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 GDNFP39905 211 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 SMIM21Q3B7S5 101 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 SPIN3Q5JUX0 258 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 DCDC5Q6ZRR9 648 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 TRAPPC6BQ86SZ2 158 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 FAM90A1Q86YD7 464 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 C1orf87Q8N0U7 546 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 SUMF2Q8NBJ7 301 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 LHX4Q969G2 390 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 B9D2Q9BPU9 175 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 IFT22Q9H7X7 185 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 SPACA1Q9HBV2 294 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 RCC2Q9P258 522 aaKnown RBP9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 NLKQ9UBE8 527 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 DNAJB11Q9UBS4 358 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 AK3Q9UIJ7 227 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 TBC1D24Q9ULP9 559 aa9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 RBMX2Q9Y388 322 aaKnown RBP9.21□□□□□ -0.94
TRAPPC4-213ENST00000533149 NOTCH3Q9UM47 2321 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 MCRIP1C9JLW8 97 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 SIRPB1O00241 398 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 PLA2G10O15496 165 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 TFF1P04155 84 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 FCER2P06734 321 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 PSG2P11465 335 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 CEBPDP49716 269 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 SFRP4Q6FHJ7 346 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF841Q6ZN19 808 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 TOMM5Q8N4H5 51 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 CD177Q8N6Q3 437 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 POC5Q8NA72 575 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 OR5R1Q8NH85 324 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 R3HDM4Q96D70 268 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 CMSS1Q9BQ75 279 aaKnown RBP9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 DPCDQ9BVM2 203 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 PPA2Q9H2U2 334 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 SEBOXQ9HB31 216 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 BIRC6Q9NR09 4857 aa9.2□□□□□ -0.94
TRAPPC4-213ENST00000533149 IGKV1D-17A0A075B6S4 117 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 ANKRD20A5PA0PJZ0 165 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 OR2AT4A6NND4 320 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 LGALS8O00214 317 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 SLC33A1O00400 549 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 LMO1P25800 156 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 KIR2DS4P43632 304 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 CBX5P45973 191 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms