RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 FPR2P25090 351 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 GDNFP39905 211 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 DLX1P56177 255 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 HLA-DRB3P79483 266 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 TMEM30BQ3MIR4 351 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 PRAMEF5Q5TYX0 476 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 ZNF782Q6ZMW2 699 aaPredicted RBP13.84□□□□□ -0.19
SF3B2-211ENST00000531041 OR52M1Q8NGK5 317 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 OR6Q1Q8NGQ2 317 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 SOSTQ9BQB4 213 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 ZNF230Q9UIE0 474 aaPredicted RBP13.84□□□□□ -0.19
SF3B2-211ENST00000531041 A0A087X0M5 115 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 CENPVL3A0A0U1RRI6 287 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 A0A1B0GX30 115 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 TRDCB7Z8K6 153 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 RNASEK-C17orf49H0YIS7 233 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 CD34P28906 385 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 KIR2DS4P43632 304 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 CBX5P45973 191 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 HTD2P86397 168 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 GUCA2AQ02747 115 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 KIR2DS1Q14954 304 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 KLF17Q5JT82 389 aaPredicted RBP13.83□□□□□ -0.2
SF3B2-211ENST00000531041 HCP5Q6MZN7 132 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 SNX29P2Q8IUI4 249 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 PRR18Q8N4B5 295 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 OR1L1Q8NH94 360 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 LHX4Q969G2 390 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 GALMQ96C23 342 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 ABHD1Q96SE0 405 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 TMEM133Q9H2Q1 129 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 SCPEP1Q9HB40 452 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 PTTG2Q9NZH5 202 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 MXRA5Q9NR99 2828 aa13.83□□□□□ -0.2
SF3B2-211ENST00000531041 TRAV40A0A0B4J280 105 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 MEIOCA2RUB1 952 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 FABP12A6NFH5 140 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 SULT1C2O00338 296 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 LPLP06858 475 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 UBE2E1P51965 193 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 LOXL3P58215 753 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 KLRD1Q13241 179 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 MADCAM1Q13477 382 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 GPR157Q5UAW9 335 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 PYHIN1Q6K0P9 492 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 C5orf24Q7Z6I8 188 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 CCDC190Q86UF4 302 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 OR13D1Q8NGV5 346 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 UBALD1Q8TB05 177 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 GPX8Q8TED1 209 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 GCDHQ92947 438 aaPredicted RBP13.82□□□□□ -0.2
SF3B2-211ENST00000531041 ST6GALNAC5Q9BVH7 336 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 ZNF286AQ9HBT8 521 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 CDC42EP3Q9UKI2 254 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 SVEP1Q4LDE5 3571 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 NAV3Q8IVL0 2385 aa13.82□□□□□ -0.2
SF3B2-211ENST00000531041 SDCBPO00560 298 aaPredicted RBP13.81□□□□□ -0.2
SF3B2-211ENST00000531041 SCTP09683 121 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 IGHV4-38-2P0DP08 117 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 NFYBP25208 207 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 BPIFB3P59826 476 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
SF3B2-211ENST00000531041 IL18Q14116 193 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 OR11H6Q8NGC7 330 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 OR4A4PQ8NGN8 299 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 MAFIPQ8WZ33 124 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 GFOD1Q9NXC2 390 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 IGKV1D-8A0A087WSZ0 117 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 IGHV2-26A0A0B4J1V2 119 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 IGHV1-69DA0A0B4J2H0 117 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 INAFM1C9JVW0 142 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 CTDSPLO15194 276 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 FABP7O15540 132 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 DIRAS3O95661 229 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 IGHV1-69P01742 117 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 ETV6P41212 452 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 MRPS10P82664 201 aaKnown RBP13.81□□□□□ -0.2
SF3B2-211ENST00000531041 LTC4SQ16873 150 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 IL17RELQ6ZVW7 336 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 HOGA1Q86XE5 327 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 PNKDQ8N490 385 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 GVQW1Q8N7I0 195 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 SUCNR1Q9BXA5 334 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 CLEC7AQ9BXN2 247 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 BEX2Q9BXY8 128 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 OR2S2Q9NQN1 319 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 JPT1Q9UK76 154 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 NUP50Q9UKX7 468 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 ANAPC10Q9UM13 185 aa13.81□□□□□ -0.2
SF3B2-211ENST00000531041 TEP1Q99973 2627 aaKnown RBP13.8□□□□□ -0.2
SF3B2-211ENST00000531041 GABARAPH6UMI1 98 aa13.8□□□□□ -0.2
SF3B2-211ENST00000531041 GSTT2P0CG29 244 aa13.8□□□□□ -0.2
SF3B2-211ENST00000531041 GSTT2BP0CG30 244 aa13.8□□□□□ -0.2
SF3B2-211ENST00000531041 PTBP1P26599 531 aaKnown RBP eCLIP13.8□□□□□ -0.2
SF3B2-211ENST00000531041 Q3ZCU0 254 aa13.8□□□□□ -0.2
SF3B2-211ENST00000531041 SPANXN2Q5MJ10 180 aa13.8□□□□□ -0.2
SF3B2-211ENST00000531041 STEAP3Q658P3 488 aa13.8□□□□□ -0.2
SF3B2-211ENST00000531041 ZNF626Q68DY1 528 aa13.8□□□□□ -0.2
SF3B2-211ENST00000531041 FAM131AQ6UXB0 335 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms