RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 C1orf94Q6P1W5 598 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 ULK3Q6PHR2 472 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 ZNF497Q6ZNH5 498 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 PRSS48Q7RTY5 328 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 LCA5Q86VQ0 697 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 CLECL1Q8IZS7 167 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 ABHD12Q8N2K0 398 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 STPG2Q8N412 459 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 DCUN1D4Q92564 292 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 MS4A14Q96JA4 679 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 GAFA1Q96PS6 74 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 ARMC7Q9H6L4 198 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 SLCO1B3Q9NPD5 702 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 STX18Q9P2W9 335 aaKnown RBP4.96□□□□□ -1.62
SVIP-204ENST00000530199 RPS6KB2Q9UBS0 482 aa4.96□□□□□ -1.62
SVIP-204ENST00000530199 OR6C6A6NF89 314 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 SERPINE3A8MV23 424 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 PGRMC1O00264 195 aaKnown RBP4.95□□□□□ -1.62
SVIP-204ENST00000530199 SGCEO43556 437 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 IGF1P05019 195 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 PRPS1L1P21108 318 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 MSR1P21757 451 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 NAA20P61599 178 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 EWSR1Q01844 656 aaKnown RBP eCLIP4.95□□□□□ -1.62
SVIP-204ENST00000530199 TNFRSF9Q07011 255 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 ZNF616Q08AN1 781 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 IL18R1Q13478 541 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 CFAP157Q5JU67 520 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 CALHM1Q8IU99 346 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 SLC22A9Q8IVM8 553 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 C11orf53Q8IXP5 236 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 LRRC34Q8IZ02 419 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 Q8N377 158 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 OR1N2Q8NGR9 330 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 OR13D1Q8NGV5 346 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 TCP10LQ8TDR4 215 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 LRRC29Q8WV35 223 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 ADAT1Q9BUB4 502 aaKnown RBP4.95□□□□□ -1.62
SVIP-204ENST00000530199 COMMD4Q9H0A8 199 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 TXNIPQ9H3M7 391 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 USE1Q9NZ43 259 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 MARCOQ9UEW3 520 aaPredicted RBP4.95□□□□□ -1.62
SVIP-204ENST00000530199 ZNF391Q9UJN7 358 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 HHLA2Q9UM44 414 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 HILPDAQ9Y5L2 63 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 FAT1Q14517 4588 aa4.95□□□□□ -1.62
SVIP-204ENST00000530199 TRBV7-9A0A0J9YWB2 115 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 C17orf98A8MV24 154 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 I3L521 148 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 IGLV1-51P01701 117 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 IGHG2P01859 326 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 SNRPCP09234 159 aaKnown RBP4.94□□□□□ -1.62
SVIP-204ENST00000530199 OR8U9P0C7N5 309 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 ANXA3P12429 323 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 ZNF823P16415 610 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 BRS3P32247 399 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 GUCA1AP43080 201 aaPredicted RBP4.94□□□□□ -1.62
SVIP-204ENST00000530199 DAP3P51398 398 aaKnown RBP4.94□□□□□ -1.62
SVIP-204ENST00000530199 UGT2B15P54855 530 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 ERVK11-1P61568 191 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 HOXC5Q00444 222 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 ZNF45Q02386 682 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 FMODQ06828 376 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 ZNF506Q5JVG8 444 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 ZNF343Q6P1L6 599 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 REG3GQ6UW15 175 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 WDR82Q6UXN9 313 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 TMUB2Q71RG4 321 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 PGAM4Q8N0Y7 254 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 KRTCAP2Q8N6L1 136 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 ZNF645Q8N7E2 425 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 ANGPTL6Q8NI99 470 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 FNDC8Q8TC99 324 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 MYOZ3Q8TDC0 251 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 SLC7A6Q92536 515 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 SEH1LQ96EE3 360 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 TMED9Q9BVK6 235 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 GON7Q9BXV9 100 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 IKZF5Q9H5V7 419 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 AMBNQ9NP70 447 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 C19orf12Q9NSK7 152 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 CALML5Q9NZT1 146 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 RNF24Q9Y225 148 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 IFT52Q9Y366 437 aa4.94□□□□□ -1.62
SVIP-204ENST00000530199 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
SVIP-204ENST00000530199 IGHV3OR16-12A0A075B7B8 117 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 A0A0B4J2E0 115 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 A0A0J9YWU9 116 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 A0A1B0GX12 115 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 MAGEB3O15480 346 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 CNIH1O95406 144 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 RBP4P02753 201 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 MT-ND1P03886 318 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 ASAH2BP0C7U1 165 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 RPA2P15927 270 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 CD24P25063 80 aa4.93□□□□□ -1.62
SVIP-204ENST00000530199 NAA10P41227 235 aaPredicted RBP4.93□□□□□ -1.62
SVIP-204ENST00000530199 CYLC2Q14093 348 aaPredicted RBP4.93□□□□□ -1.62
SVIP-204ENST00000530199 SLX4IPQ5VYV7 408 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms