RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 ZNF816Q0VGE8 651 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-210ENST00000525990 GNMTQ14749 295 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 SYT6Q5T7P8 510 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-210ENST00000525990 OR10K2Q6IF99 312 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 RAB12Q6IQ22 244 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 ETV3LQ6ZN32 361 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 MOB3BQ86TA1 216 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 LINC00596Q86U02 117 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 THNSL2Q86YJ6 484 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 OR8H3Q8N146 312 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 ZNF439Q8NDP4 499 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 OR10A7Q8NGE5 316 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 OR4X2Q8NGF9 303 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 ST6GALNAC6Q969X2 333 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 EAF1Q96JC9 268 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-210ENST00000525990 Q96M66 194 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 C8orf4Q9NR00 106 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 PLCXD1Q9NUJ7 323 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 PSMB11A5LHX3 300 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 MCRIP1C9JLW8 97 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 ZNF780AO75290 641 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-210ENST00000525990 HBZP02008 142 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 PF4P02776 101 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 GZMHP20718 246 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 MED21Q13503 144 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 LCNL1Q6ZST4 164 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 Q8N6K4 173 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 WFDC9Q8NEX5 89 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 MRAPQ8TCY5 172 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 RTN4IP1Q8WWV3 396 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-210ENST00000525990 TFAP2CQ92754 450 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 PCDHB16Q9NRJ7 776 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 TRAPPC2LQ9UL33 140 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 PEX16Q9Y5Y5 336 aa9.52□□□□□ -0.89
SSBP3-210ENST00000525990 M0QZK8 103 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 ORC5O43913 435 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 GAPDHP04406 335 aaKnown RBP9.51□□□□□ -0.89
SSBP3-210ENST00000525990 CDK1P06493 297 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 GABPB1Q06547 395 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-210ENST00000525990 EBI3Q14213 229 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 GPR176Q14439 515 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 CT45A1Q5HYN5 189 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 SLC16A12Q6ZSM3 486 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 SLC25A48Q6ZT89 311 aaKnown RBP9.51□□□□□ -0.89
SSBP3-210ENST00000525990 LRRTM1Q86UE6 522 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 GAPTQ8N292 157 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 LINC00311Q8N616 119 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 Q8N9W7 124 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 OR52M1Q8NGK5 317 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 CT45A3Q8NHU0 189 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 NRG4Q8WWG1 115 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 TMED9Q9BVK6 235 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 NECAP2Q9NVZ3 263 aa9.51□□□□□ -0.89
SSBP3-210ENST00000525990 LSM2Q9Y333 95 aaKnown RBP9.51□□□□□ -0.89
SSBP3-210ENST00000525990 NCBP2LA6PVI3 153 aaKnown RBP9.5□□□□□ -0.89
SSBP3-210ENST00000525990 SERPINE3A8MV23 424 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 PTGES3LE9PB15 166 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 FGF16O43320 207 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 SC5DO75845 299 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 MPIG6BO95866 241 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 IGHG2P01859 326 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 CD1AP06126 327 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 HOXD3P31249 432 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-210ENST00000525990 AQP4P55087 323 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 KRTAP10-11P60412 298 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 ACSM3Q53FZ2 586 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 NKAPLQ5M9Q1 402 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 UNQ9370/PRO34162Q6UXP9 181 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 SLC35E3Q7Z769 313 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 IZUMO1Q8IYV9 350 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 LINC00482Q8N8I6 264 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 OR52L2PQ8NGH6 319 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 MRPL30Q8TCC3 161 aaKnown RBP9.5□□□□□ -0.89
SSBP3-210ENST00000525990 MRPS24Q96EL2 167 aaKnown RBP9.5□□□□□ -0.89
SSBP3-210ENST00000525990 DUX3Q96PT4 197 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 HSPB9Q9BQS6 159 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 SULT4A1Q9BR01 284 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 NICN1Q9BSH3 213 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 TAF9BQ9HBM6 251 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 PLSCR3Q9NRY6 295 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 GNG12Q9UBI6 72 aa9.5□□□□□ -0.89
SSBP3-210ENST00000525990 PDCD6O75340 191 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 VSIG8P0DPA2 414 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 FUT3P21217 361 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 PPP1CCP36873 323 aaKnown RBP9.49□□□□□ -0.89
SSBP3-210ENST00000525990 F2RL1P55085 397 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 RPL23AP62750 156 aaKnown RBP9.49□□□□□ -0.89
SSBP3-210ENST00000525990 GPR50Q13585 617 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 RBM48Q5RL73 367 aaKnown RBP9.49□□□□□ -0.89
SSBP3-210ENST00000525990 C6orf141Q5SZD1 244 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 OR2W3Q7Z3T1 314 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 C6orf201Q7Z4U5 140 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 CDH26Q8IXH8 852 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 MRPL41Q8IXM3 137 aaKnown RBP9.49□□□□□ -0.89
SSBP3-210ENST00000525990 STPG2Q8N412 459 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 NKAIN3Q8N8D7 197 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 C8orf31Q8N9H6 132 aa9.49□□□□□ -0.89
SSBP3-210ENST00000525990 SPACA1Q9HBV2 294 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms