RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 OR2T29Q8NH02 315 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 OR1P1Q8NH06 330 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 SLC37A2Q8TED4 501 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 SMARCD1Q96GM5 515 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 PLA2G2FQ9BZM2 168 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 ARV1Q9H2C2 271 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 SPNS1Q9H2V7 528 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 RNF167Q9H6Y7 350 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 VSIRQ9H7M9 311 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 NMNAT1Q9HAN9 279 aaPredicted RBP3.63□□□□□ -1.83
CD44-220ENST00000525688 MIEF1Q9NQG6 463 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 FAM49BQ9NUQ9 324 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 RBM22Q9NW64 420 aaKnown RBP eCLIP3.63□□□□□ -1.83
CD44-220ENST00000525688 TAS2R1Q9NYW7 299 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 ANXA10Q9UJ72 324 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 KLK13Q9UKR3 277 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 SLC35A3Q9Y2D2 325 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 SIGLEC9Q9Y336 463 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 MOB4Q9Y3A3 225 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 PRELID3BQ9Y3B1 194 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 CACNA1HO95180 2353 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 F5P12259 2224 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 DMXL1Q9Y485 3027 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 GREB1Q4ZG55 1949 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 TRAV19A0A0A6YYK7 116 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 PRORSD1PA6NEY8 169 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 E9PLD3 99 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 F8W036 122 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 IGHV3-13P01766 116 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 THY1P04216 161 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 PAEPP09466 180 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 FAM228BP0C875 321 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 CD37P11049 281 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 CD99P14209 185 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 AK4P27144 223 aaPredicted RBP3.62□□□□□ -1.83
CD44-220ENST00000525688 ADORA2BP29275 332 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 S100GP29377 79 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 TSPOP30536 169 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 PFN2P35080 140 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 PPICP45877 212 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 GPR6P46095 362 aaPredicted RBP3.62□□□□□ -1.83
CD44-220ENST00000525688 APOC4P55056 127 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 LMO4P61968 165 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 NUTF2P61970 127 aaKnown RBP3.62□□□□□ -1.83
CD44-220ENST00000525688 SLC7A9P82251 487 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 PSG4Q00888 419 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 MYL5Q02045 173 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 SLC10A7Q0GE19 358 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 SMAGPQ0VAQ4 97 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 PRSS8Q16651 343 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 ACSBG2Q5FVE4 666 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 KLF17Q5JT82 389 aaPredicted RBP3.62□□□□□ -1.83
CD44-220ENST00000525688 RPL13AP3Q6NVV1 102 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 ZFP1Q6P2D0 407 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 SFXN4Q6P4A7 337 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 XKRXQ6PP77 449 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 TMEM86BQ8N661 226 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 OR4F15Q8NGB8 312 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 OR1L8Q8NGR8 309 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 OR4X1Q8NH49 305 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 NT5CQ8TCD5 201 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 TNFAIP8L1Q8WVP5 186 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 TMEM230Q96A57 120 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 HAUS1Q96CS2 278 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 DCSTAMPQ9H295 470 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 FBXL15Q9H469 300 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 TMEM138Q9NPI0 162 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 KCNIP1Q9NZI2 227 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 OR1A1Q9P1Q5 309 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 CCL26Q9Y258 94 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 ZNF257Q9Y2Q1 563 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 HSPB11Q9Y547 144 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 OBSL1O75147 1896 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 ZNF292O60281 2723 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 DENND4CQ5VZ89 1909 aa3.62□□□□□ -1.83
CD44-220ENST00000525688 COL4A2P08572 1712 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 PATJQ8NI35 1801 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 NUP210Q8TEM1 1887 aaPredicted RBP3.61□□□□□ -1.83
CD44-220ENST00000525688 PIEZO1Q92508 2521 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 IGKV3D-15A0A087WSY6 115 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 IGHV1OR21-1A0A087WYE8 117 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 FAM159BA6NKW6 160 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 ZNF726A6NNF4 738 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 EVPLLA8MZ36 301 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 LINC01619G3V211 115 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 GPR75O95800 540 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 CRYGDP07320 174 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 SLC35G6P0C7Q6 338 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 GGT1P19440 569 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 OR3A4PP47883 348 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 RPL34P49207 117 aaKnown RBP3.61□□□□□ -1.83
CD44-220ENST00000525688 CSRP3P50461 194 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 RND2P52198 227 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 TCTAP57738 103 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 RAB2AP61019 212 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 RAB5BP61020 215 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 NAA20P61599 178 aa3.61□□□□□ -1.83
CD44-220ENST00000525688 IFITM2Q01629 132 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms