RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RBM11P57052 281 aaKnown RBP12.03□□□□□ -0.48
SYNPO-205ENST00000522122 ERVS71-1P61550 626 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 BTNL3Q6UXE8 466 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 FLVCR1-AS1Q8TAF5 88 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 PRO1933Q9H354 126 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 BARX1Q9HBU1 254 aaPredicted RBP12.03□□□□□ -0.48
SYNPO-205ENST00000522122 PARD6AQ9NPB6 346 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 RCC2Q9P258 522 aaKnown RBP12.03□□□□□ -0.48
SYNPO-205ENST00000522122 hADV38S2A0JD32 116 aa12.02□□□□□ -0.48
SYNPO-205ENST00000522122 LMX1BO60663 402 aa12.02□□□□□ -0.48
SYNPO-205ENST00000522122 TMEM50BP56557 158 aa12.02□□□□□ -0.48
SYNPO-205ENST00000522122 MRGPRGQ86SM5 289 aa12.02□□□□□ -0.48
SYNPO-205ENST00000522122 ADTRPQ96IZ2 230 aa12.02□□□□□ -0.48
SYNPO-205ENST00000522122 SIRT7Q9NRC8 400 aa12.02□□□□□ -0.48
SYNPO-205ENST00000522122 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.48
SYNPO-205ENST00000522122 MTCL1Q9Y4B5 1905 aaKnown RBP12.02□□□□□ -0.48
SYNPO-205ENST00000522122 ELOA3CA0A087WX78 387 aaPredicted RBP12.02□□□□□ -0.49
SYNPO-205ENST00000522122 A0A1B0GTI1 187 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 HAND1O96004 215 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 MMP7P09237 267 aaPredicted RBP12.02□□□□□ -0.49
SYNPO-205ENST00000522122 NHLH2Q02577 135 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 TRAV39A0A0B4J263 110 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 KIAA1324LA8MWY0 1029 aaPredicted RBP12.02□□□□□ -0.49
SYNPO-205ENST00000522122 ADAM11O75078 769 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 GZMHP20718 246 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 TNFAIP6P98066 277 aaPredicted RBP12.02□□□□□ -0.49
SYNPO-205ENST00000522122 C3AR1Q16581 482 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 MAFAQ8NHW3 353 aaPredicted RBP12.02□□□□□ -0.49
SYNPO-205ENST00000522122 CARHSP1Q9Y2V2 147 aaKnown RBP12.02□□□□□ -0.49
SYNPO-205ENST00000522122 MELTFP08582 738 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 PGA4P0DJD7 388 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 ADAMTS17Q8TE56 1095 aa12.02□□□□□ -0.49
SYNPO-205ENST00000522122 PRR32B1ATL7 298 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 MS4A18H0YCH9 400 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 CTSBP07858 339 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 MRPS11P82912 194 aaKnown RBP12.01□□□□□ -0.49
SYNPO-205ENST00000522122 MS4A18Q3C1V0 323 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 TET1Q8NFU7 2136 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 OR10AD1Q8NGE0 317 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 NOL4LQ96MY1 436 aaPredicted RBP12.01□□□□□ -0.49
SYNPO-205ENST00000522122 RSPO3Q9BXY4 272 aaPredicted RBP12.01□□□□□ -0.49
SYNPO-205ENST00000522122 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 C11orf94C9JXX5 98 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 DEDDO75618 318 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 SLC25A47Q6Q0C1 308 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 GFRALQ6UXV0 394 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 OR2T6Q8NHC8 308 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 SLC31A2O15432 143 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 F2RP25116 425 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 OR5I1Q13606 314 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 OR10A7Q8NGE5 316 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 GAL3ST2Q9H3Q3 398 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 ZBTB34Q8NCN2 500 aa12.01□□□□□ -0.49
SYNPO-205ENST00000522122 BCL2L2Q92843 193 aaPredicted RBP12.01□□□□□ -0.49
SYNPO-205ENST00000522122 CEP250Q9BV73 2442 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 HKR1P10072 659 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 P2RY4P51582 365 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 SOX8P57073 446 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 PSG4Q00888 419 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 VAMP3Q15836 100 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 ETFRF1Q6IPR1 90 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 SSX7Q7RTT5 188 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 SLC35E3Q7Z769 313 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 MOB3AQ96BX8 217 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 ANAPC16Q96DE5 110 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 GYPAP02724 150 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 IGFBP3P17936 291 aaPredicted RBP12□□□□□ -0.49
SYNPO-205ENST00000522122 KHDC3LQ587J8 217 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 RNF222A6NCQ9 220 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 KLK10O43240 276 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 PSG2P11465 335 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 ANKRD55Q3KP44 614 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 TMEM108Q6UXF1 575 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 OR1A1Q9P1Q5 309 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 C21orf140B9A014 251 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 GATCO43716 136 aaKnown RBP12□□□□□ -0.49
SYNPO-205ENST00000522122 SLC25A5P05141 298 aaKnown RBP12□□□□□ -0.49
SYNPO-205ENST00000522122 HNRNPA3P51991 378 aaKnown RBP12□□□□□ -0.49
SYNPO-205ENST00000522122 HES3Q5TGS1 186 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 LINC00596Q86U02 117 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 OR10G8Q8NGN5 311 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 TLNRD1Q9H1K6 362 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 C5orf66Q9H5L9 145 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 ZMAT5Q9UDW3 170 aaKnown RBP12□□□□□ -0.49
SYNPO-205ENST00000522122 LHFPL6Q9Y693 200 aa12□□□□□ -0.49
SYNPO-205ENST00000522122 ZDBF2Q9HCK1 2354 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 PQLC2LA1A4F0 135 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 TGFBR3LH3BV60 316 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 LY6G6FQ5SQ64 297 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 TMEM252Q8N6L7 170 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 OR2M7Q8NG81 312 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 SCN5AQ14524 2016 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 LOC102723971A0A1B0GUV8 181 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 A0A1W2PN81 502 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 FNDC7Q5VTL7 733 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 CCL17Q92583 94 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 FAM122AQ96E09 287 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 MISP3Q96FF7 219 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms