RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 LIAT1Q6ZQX7 453 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 CDS2O95674 445 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 OR5AC1P0C628 307 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 THYN1Q9P016 225 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 FOXJ2Q9P0K8 574 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 ADAP1O75689 374 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 ID4P47928 161 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 C21orf62-AS1Q17RA5 79 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 RSPO4Q2I0M5 234 aaPredicted RBP14.12□□□□□ -0.15
USP42-207ENST00000521713 VWA1Q6PCB0 445 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 VSTM2AQ8TAG5 236 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 SLC7A10Q9NS82 523 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 IL36GQ9NZH8 169 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 DEFB108AA8MXU0 73 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 HAND1O96004 215 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 TMEM11P17152 192 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 LIMK1P53667 647 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 OR5I1Q13606 314 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 PTX4Q96A99 478 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 CHST5Q9GZS9 411 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 NINQ8N4C6 2090 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 TMEM267Q0VDI3 215 aaPredicted RBP14.12□□□□□ -0.15
USP42-207ENST00000521713 KLRB1Q12918 225 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 RNF2Q99496 336 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 ZNF835Q9Y2P0 537 aa14.12□□□□□ -0.15
USP42-207ENST00000521713 PRR19A6NJB7 356 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 COX6B1P14854 86 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 RTP5Q14D33 572 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 CDCP2Q5VXM1 449 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 OOEPA6NGQ2 149 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 K7ESF4 209 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 ZNF253O75346 499 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 FGF2P09038 288 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 CXCL2P19875 107 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 GPX7Q96SL4 187 aaPredicted RBP14.11□□□□□ -0.15
USP42-207ENST00000521713 TMEM167BQ9NRX6 74 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 C1RLQ9NZP8 487 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 LPAR6P43657 344 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 PRSS12P56730 875 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 RIPPLY2Q5TAB7 128 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 ZNF343Q6P1L6 599 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 DHRS11Q6UWP2 260 aa14.11□□□□□ -0.15
USP42-207ENST00000521713 PUSL1Q8N0Z8 303 aaKnown RBP14.11□□□□□ -0.15
USP42-207ENST00000521713 PCDHGA9Q9Y5G4 932 aaKnown RBP14.11□□□□□ -0.15
USP42-207ENST00000521713 C4orf51C9J302 202 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 PDE6DO43924 150 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 SEMA7AO75326 666 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 EFEMP2O95967 443 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 HLA-DQB1P01920 261 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 PGA4P0DJD7 388 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 PGA5P0DJD9 388 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 DAOP14920 347 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 MRPS11P82912 194 aaKnown RBP14.1□□□□□ -0.15
USP42-207ENST00000521713 MIA3Q5JRA6 1907 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 PECRQ9BY49 303 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 SNCGO76070 127 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 TIAF1O95411 115 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 F2RP25116 425 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 TMEM91Q6ZNR0 172 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 IGKV3-11P04433 115 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 OR2T6Q8NHC8 308 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 OR2D2Q9H210 308 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 CLN8Q9UBY8 286 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 TIMM9Q9Y5J7 89 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 GYPAP02724 150 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 OR5AL1P0C617 328 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 SCGB1C2P0DMR2 95 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 VDAC1P21796 283 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 FHL5Q5TD97 284 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 LINC00596Q86U02 117 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 GPA33Q99795 319 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 ATG101Q9BSB4 218 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 OR2J1Q9GZK6 312 aa14.1□□□□□ -0.15
USP42-207ENST00000521713 M0R2Z0 102 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 BMPR1BO00238 502 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 CTSBP07858 339 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 GGTLC2Q14390 218 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 ZNF738Q8NE65 137 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 BCL2L2Q92843 193 aaPredicted RBP14.09□□□□□ -0.15
USP42-207ENST00000521713 WDR13Q9H1Z4 485 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 A0A1W2PN81 502 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 TRDCB7Z8K6 153 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 ATXN7O15265 892 aaPredicted RBP14.09□□□□□ -0.15
USP42-207ENST00000521713 DDTP30046 118 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 LSM11P83369 360 aaKnown RBP eCLIP14.09□□□□□ -0.15
USP42-207ENST00000521713 OR4S2Q8NH73 311 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 OPN3Q9H1Y3 402 aaPredicted RBP14.09□□□□□ -0.15
USP42-207ENST00000521713 SPTBN2O15020 2390 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 GPR6P46095 362 aaPredicted RBP14.09□□□□□ -0.15
USP42-207ENST00000521713 CSRP3P50461 194 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 RPL24P83731 157 aaKnown RBP14.09□□□□□ -0.15
USP42-207ENST00000521713 FUT5Q11128 374 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 ZNF660Q6AZW8 331 aaPredicted RBP14.09□□□□□ -0.15
USP42-207ENST00000521713 PRSS3P2Q8NHM4 247 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 SEBOXQ9HB31 216 aaPredicted RBP14.09□□□□□ -0.15
USP42-207ENST00000521713 ANXA10Q9UJ72 324 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 Q1RN00 199 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 ACY3Q96HD9 319 aa14.09□□□□□ -0.15
USP42-207ENST00000521713 BARX1Q9HBU1 254 aaPredicted RBP14.09□□□□□ -0.15
USP42-207ENST00000521713 IGHV3-43A0A0B4J1X8 118 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms