RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FAM131CQ96AQ9 280 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM122AQ96E09 287 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 MED8Q96G25 268 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF681Q96N22 645 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 IP6K3Q96PC2 410 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 CCNL2Q96S94 520 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 SCN2AQ99250 2005 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 KIR2DL4Q99706 377 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ARHGDIGQ99819 225 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BNQ99877 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BMQ99879 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BLQ99880 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 AIF1LQ9BQI0 150 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 MS4A8Q9BY19 250 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 PLA2G12AQ9BZM1 189 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 CHST6Q9GZX3 395 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2AG1Q9H205 316 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ARV1Q9H2C2 271 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR51V1Q9H2C8 321 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR51B6Q9H340 312 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 GAL3ST2Q9H3Q3 398 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ISG20L2Q9H9L3 353 aaKnown RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RHOFQ9HBH0 211 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 BEX1Q9HBH7 125 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 UBQLN4Q9NRR5 601 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 CALML5Q9NZT1 146 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 DOK5Q9P104 306 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 P2RX2Q9UBL9 471 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 MTFP1Q9UDX5 166 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 APOBEC3BQ9UH17 382 aaKnown RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 CD84Q9UIB8 345 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF230Q9UIE0 474 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 FOXJ3Q9UPW0 622 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 CCL26Q9Y258 94 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 GOLT1BQ9Y3E0 138 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ABCA7Q8IZY2 2146 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RALGAPA1Q6GYQ0 2036 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 TRPM6Q9BX84 2022 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 MPDZO75970 2070 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A087WUU8 490 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A087WWC5 75 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 FXYD6-FXYD2A0A087WZ82 144 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 GGT3PA6NGU5 568 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5H1A6NKK0 313 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF726A6NNF4 738 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 CEACAM18A8MTB9 384 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF879B4DU55 563 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 C5orf67F2Z3F1 127 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 TSTD3H0UI37 97 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 PLPP1O14494 284 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 PIN1P1O15428 100 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 MAGEB4O15481 346 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10H3O60404 316 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 YPEL1O60688 119 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 CA11O75493 328 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 REM1O75628 298 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 GLSO94925 669 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SOX14O95416 240 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 RAB3DO95716 219 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 PMP2P02689 132 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OPN1SWP03999 348 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SFTA3P0C7M3 94 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 P0C879 139 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SMIM10L1P0DMW3 83 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 IL9P15248 144 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 FOLR1P15328 257 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 CSNK2A2P19784 350 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 NT5EP21589 574 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC2A5P22732 501 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 IGHV1-2P23083 117 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZBTB25P24278 435 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 AQP1P29972 269 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 MPIP34949 423 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 LPAR6P43657 344 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 GPR1P46091 355 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OMPP47874 163 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 INPP1P49441 399 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 CCL23P55773 120 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 CLDN12P56749 244 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 AP3S2P59780 193 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 GMFBP60983 142 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SKP1P63208 163 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 CSNK1G2P78368 415 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OC90Q02509 493 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 GLO1Q04760 184 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SSBP1Q04837 148 aaKnown RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ST3GAL3Q11203 375 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 BIKQ13323 160 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 DDX39BQ13838 428 aaKnown RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ELAVL3Q14576 367 aaKnown RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 RHEBQ15382 184 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 RSU1Q15404 277 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 UBE2V2Q15819 145 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF791Q3KP31 576 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10K2Q6IF99 312 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ADNP2Q6IQ32 1131 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 TNFAIP8L2Q6P589 184 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZCCHC12Q6PEW1 402 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 CLEC2AQ6UVW9 174 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF620Q6ZNG0 422 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms