RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TRAPPC6BQ86SZ2 158 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 SNX29P2Q8IUI4 249 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 MFSD4AQ8N468 514 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 PNKDQ8N490 385 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 ARL11Q969Q4 196 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 DIRAS2Q96HU8 199 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 AJUBAQ96IF1 538 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 SDHCQ99643 169 aaPredicted RBP8.07□□□□□ -1.12
CLN8-202ENST00000517514 PCGF1Q9BSM1 259 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 RIMS4Q9H426 269 aaPredicted RBP8.07□□□□□ -1.12
CLN8-202ENST00000517514 YAE1D1Q9NRH1 226 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 IDI2-AS1Q9NZ38 188 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 ZNRD1Q9P1U0 126 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 TRAPPC2LQ9UL33 140 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 MRPS7Q9Y2R9 242 aaKnown RBP8.07□□□□□ -1.12
CLN8-202ENST00000517514 AUP1Q9Y679 476 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 NIPBLQ6KC79 2804 aaeCLIP8.07□□□□□ -1.12
CLN8-202ENST00000517514 A0A087X0M5 115 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 IGHV3-43A0A0B4J1X8 118 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 CENPVL3A0A0U1RRI6 287 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 A0A1B0GX30 115 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 FAM172BPA6NC97 362 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 POM121CA8CG34 1229 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 A8MV72 311 aaPredicted RBP8.06□□□□□ -1.12
CLN8-202ENST00000517514 TRDCB7Z8K6 153 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 CTDSPLO15194 276 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 LANCL1O43813 399 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 FCER2P06734 321 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 GSTT2P0CG29 244 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 GSTT2BP0CG30 244 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 IGHV3-43DP0DP04 118 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 GNG2P59768 71 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 HLA-DRB3P79483 266 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 DGCR2P98153 550 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 TUSC1Q2TAM9 212 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 C6orf183Q5T699 404 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 METTL11BQ5VVY1 283 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 MOB1BQ7L9L4 216 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 ZNF554Q86TJ5 538 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 HOGA1Q86XE5 327 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 LDLRAD3Q86YD5 345 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 LYSMD2Q8IV50 215 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 ZNF565Q8N9K5 539 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 ZNF439Q8NDP4 499 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 OR52L2PQ8NGH6 319 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 OR52I2Q8NH67 350 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 SETD6Q8TBK2 473 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 LEAP2Q969E1 77 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 PHF21AQ96BD5 680 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 PARP12Q9H0J9 701 aaKnown RBP8.06□□□□□ -1.12
CLN8-202ENST00000517514 METTL8Q9H825 291 aaKnown RBP8.06□□□□□ -1.12
CLN8-202ENST00000517514 ZNF286AQ9HBT8 521 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 CHMP1AQ9HD42 196 aaPredicted RBP8.06□□□□□ -1.12
CLN8-202ENST00000517514 AKIP1Q9NQ31 210 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 KCNS2Q9ULS6 477 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 SESN1Q9Y6P5 492 aa8.06□□□□□ -1.12
CLN8-202ENST00000517514 IGHV3OR16-10A0A075B7F0 116 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 FABP12A6NFH5 140 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 ODF3BA8MYP8 253 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 SLC31A2O15432 143 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 IGHV3-7P01780 117 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 FPR2P25090 351 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 CD34P28906 385 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 PRSS3P35030 304 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 ZNF134P52741 427 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 PITPNAQ00169 270 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 LTC4SQ16873 150 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 IGSF11Q5DX21 431 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 RNASE12Q5GAN4 147 aaKnown RBP8.05□□□□□ -1.12
CLN8-202ENST00000517514 FAM120AOSQ5T036 256 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 RUSC1-AS1Q66K80 236 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 OR52W1Q6IF63 320 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 PYHIN1Q6K0P9 492 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 PDZD9Q8IXQ8 264 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 OR52M1Q8NGK5 317 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 LHX4Q969G2 390 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 CABLES2Q9BTV7 478 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 ST6GALNAC5Q9BVH7 336 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 SUCNR1Q9BXA5 334 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 SRRQ9GZT4 340 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 TMEM133Q9H2Q1 129 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 GAL3ST2Q9H3Q3 398 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 SCPEP1Q9HB40 452 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 TMEM160Q9NX00 188 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 GFOD1Q9NXC2 390 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 OR1A1Q9P1Q5 309 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 KLK11Q9UBX7 282 aa8.05□□□□□ -1.12
CLN8-202ENST00000517514 MTORP42345 2549 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 IGHV2-26A0A0B4J1V2 119 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 TRAV40A0A0B4J280 105 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 A0A1W2PPH5 198 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 A0A1W2PRD5 423 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 A0A1W2PRF3 423 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 A0A1W2PRM7 423 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 INAFM1C9JVW0 142 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 GABARAPH6UMI1 98 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 SULT1C2O00338 296 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 FABP7O15540 132 aa8.04□□□□□ -1.12
CLN8-202ENST00000517514 GSTZ1O43708 216 aaPredicted RBP8.04□□□□□ -1.12
CLN8-202ENST00000517514 IGLV1-47P01700 117 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms