RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 LRRC10Q5BKY1 277 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 STUMQ69YW2 141 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 IDO2Q6ZQW0 420 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 Q6ZS49 121 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 SLC25A26Q70HW3 274 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 RTN4RL2Q86UN3 420 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 SLC25A42Q86VD7 318 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 LHFPL1Q86WI0 220 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 OSR2Q8N2R0 312 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 BPIFB2Q8N4F0 458 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 GVQW1Q8N7I0 195 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 OR5D18Q8NGL1 313 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 NANPQ8TBE9 248 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 ZFAND1Q8TCF1 268 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 CCDC107Q8WV48 283 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 SDSLQ96GA7 329 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 HYLS1Q96M11 299 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 DMRTB1Q96MA1 342 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 ZNF488Q96MN9 340 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 RANBP3Q9H6Z4 567 aaPredicted RBP6.89□□□□□ -1.31
CCL28-204ENST00000514421 IFT22Q9H7X7 185 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 HES4Q9HCC6 221 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 IFT46Q9NQC8 304 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 MTCH1Q9NZJ7 389 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 CTSZQ9UBR2 303 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 AUP1Q9Y679 476 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 NF1P21359 2839 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 IGKV1D-17A0A075B6S4 117 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 IGHV2-70DA0A0C4DH43 119 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 TMEM82A0PJX8 343 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 FAM172BPA6NC97 362 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 NKX6-3A6NJ46 265 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 POM121CA8CG34 1229 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 G3V3Q6 166 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 M0QYG6 137 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 SIGLEC5O15389 551 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 ENSAO43768 121 aaKnown RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 SNAPC5O75971 98 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 KNG1P01042 644 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 CSTBP04080 98 aaKnown RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 AMY2AP04746 511 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 GLAP06280 429 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 GIPP09681 153 aaPredicted RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 PPIAL4GP0DN37 164 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 ANXA7P20073 488 aaKnown RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 HRH1P35367 487 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 TAS2R46P59540 309 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 FGF12P61328 243 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 IL13RA1P78552 427 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 IFITM2Q01629 132 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 DHODHQ02127 395 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 SURF2Q15527 256 aaPredicted RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 C1orf229Q6ZS94 237 aaPredicted RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 IL17RELQ6ZVW7 336 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 OVCH2Q7RTZ1 564 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 LINC00596Q86U02 117 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 Q8IYB0 196 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 FAM216BQ8N7L0 139 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 BEST4Q8NFU0 473 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 OR4S1Q8NGB4 309 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 OR5AP2Q8NGF4 316 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 OR10K1Q8NGX5 313 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 OR4K15Q8NH41 348 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 TERB2Q8NHR7 220 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 ZNF431Q8TF32 576 aaPredicted RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 EMG1Q92979 244 aaKnown RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 DACT3Q96B18 629 aaPredicted RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 GAFA1Q96PS6 74 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 SEC22CQ9BRL7 303 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 ZNF436Q9C0F3 470 aaPredicted RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 SEBOXQ9HB31 216 aaPredicted RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 PIPOXQ9P0Z9 390 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 RCC2Q9P258 522 aaKnown RBP6.88□□□□□ -1.31
CCL28-204ENST00000514421 OPN4Q9UHM6 478 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 ZNF222Q9UK12 451 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 MAB21L2Q9Y586 359 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 TANC2Q9HCD6 1990 aa6.88□□□□□ -1.31
CCL28-204ENST00000514421 ATRQ13535 2644 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 A0A1B0GW55 424 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 C22orf46C9J442 243 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 F8VVB4 439 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 F8VWA3 439 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 FABP7O15540 132 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 SPRY1O43609 319 aaPredicted RBP6.87□□□□□ -1.31
CCL28-204ENST00000514421 SSNA1O43805 119 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 ANGPTL7O43827 346 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 PDCD6O75340 191 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 FCN3O75636 299 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 RGS11O94810 467 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 PLATP00750 562 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 FCER2P06734 321 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 SFTPBP07988 381 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 OR4E1P0C645 316 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 DUX4L2P0CJ85 424 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 DUX4L3P0CJ86 424 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 DUX4L4P0CJ87 422 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 DUX4L5P0CJ88 424 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 DUX4L6P0CJ89 424 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 DUX4L7P0CJ90 424 aa6.87□□□□□ -1.31
CCL28-204ENST00000514421 ZBTB25P24278 435 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms