RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 RAB38P57729 211 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 TAS2R30P59541 319 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 RND3P61587 244 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 FABP5Q01469 135 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 TGIF1Q15583 401 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 HMGN3Q15651 99 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 IQCJQ1A5X6 159 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 KRTAP27-1Q3LI81 207 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 SPIN4Q56A73 249 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 TMEM255AQ5JRV8 349 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 DCST2Q5T1A1 773 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 UFSP1Q6NVU6 142 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 FBXL22Q6P050 247 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 RPL22L1Q6P5R6 122 aaKnown RBP3.3□□□□□ -1.88
NIPBL-207ENST00000513819 COX15Q7KZN9 410 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 C9orf40Q8IXQ3 194 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 TMEM123Q8N131 208 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 FTMTQ8N4E7 242 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 KLHL30-AS1Q8NEE0 82 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 OR11H7Q8NGC8 314 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 OR56A4Q8NGH8 313 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 OR2AE1Q8NHA4 323 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 OR5K2Q8NHB8 316 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 FAM110BQ8TC76 370 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 HAVCR2Q8TDQ0 301 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 RNF138Q8WVD3 245 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 FLYWCH2Q96CP2 140 aaKnown RBP3.3□□□□□ -1.88
NIPBL-207ENST00000513819 DNAJC30Q96LL9 226 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 YPEL4Q96NS1 127 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 CLCC1Q96S66 551 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 MGLLQ99685 303 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 MICU1Q9BPX6 476 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 MRPL57Q9BQC6 102 aaKnown RBP3.3□□□□□ -1.88
NIPBL-207ENST00000513819 PSMG3Q9BT73 122 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-207ENST00000513819 ELOVL3Q9HB03 270 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 LYRM2Q9NU23 88 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-207ENST00000513819 CLN8Q9UBY8 286 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 MYH6P13533 1939 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 DENND4AQ7Z401 1863 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 NWD1Q149M9 1564 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 FRMPD1Q5SYB0 1578 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 GPATCH8Q9UKJ3 1502 aaKnown RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ADGRL1O94910 1474 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ATRNO75882 1429 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 CRB1P82279 1406 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 IGHV3-35A0A0C4DH35 117 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 KBTBD11-OT1A0A1B0GTJ5 212 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 EXOC1LA0A1B0GW35 172 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 HMSDA8MTL9 139 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 FAM220BPB1ANY3 271 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 MCRIP1C9JLW8 97 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 FTCDNL1E5RQL4 147 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 E9PLD3 99 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 J3QLI3 93 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SULT2B1O00204 365 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 FCN1O00602 326 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OR7A17O14581 309 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SLC37A4O43826 429 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SCGNO76038 276 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 HLA-AP01891 365 aaKnown RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 HBZP02008 142 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 CD55P08174 381 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 GIPP09681 153 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OR4Q2P0C623 313 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 PSG2P11465 335 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 CYBAP13498 195 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 FABP4P15090 132 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 HIST1H1CP16403 213 aaKnown RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 CXCL2P19875 107 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 NFYBP25208 207 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 RPS12P25398 132 aaKnown RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 RPA3P35244 121 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OPRD1P41143 372 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 XCR1P46094 333 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 TFPI2P48307 235 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SLC25A1P53007 311 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 UBA52P62987 128 aaKnown RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 PAFAH1B2P68402 229 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SMAGPQ0VAQ4 97 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 PNOCQ13519 176 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 FZD2Q14332 565 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF77Q15935 545 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF79Q15937 498 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SLC25A52Q3SY17 297 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF660Q6AZW8 331 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 PVRIGQ6DKI7 326 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 TOMM20LQ6UXN7 152 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 HEPN1Q6WQI6 88 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF705AQ6ZN79 300 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-207ENST00000513819 C19orf35Q6ZS72 473 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 FA2HQ7L5A8 372 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 C20orf196Q8IYI0 205 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OR8I2Q8N0Y5 310 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SLC39A11Q8N1S5 342 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 SLC35G3Q8N808 338 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OR5A2Q8NGI9 324 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OR51G2Q8NGK0 314 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OR10G9Q8NGN4 311 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OR13G1Q8NGZ3 307 aa3.29□□□□□ -1.88
NIPBL-207ENST00000513819 OR56B4Q8NH76 319 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms