RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 FLVCR1-AS1Q8TAF5 88 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 ZNF675Q8TD23 568 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 ROPN1LQ96C74 230 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 AURKBQ96GD4 344 aaPredicted RBP4.82□□□□□ -1.64
CHD1-208ENST00000512392 DOHHQ9BU89 302 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 GABARAPL3Q9BY60 117 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 C20orf27Q9GZN8 174 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 POPDC3Q9HBV1 291 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 SLC23A2Q9UGH3 650 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 UGT2A1Q9Y4X1 527 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 TMEM131Q92545 1883 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 TRAV39A0A0B4J263 110 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 DNAJC9-AS1A6NH13 148 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 SHISA9B4DS77 424 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 C1QL1O75973 258 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 SNRPCP09234 159 aaKnown RBP4.82□□□□□ -1.64
CHD1-208ENST00000512392 EVX1P49640 407 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 WNT4P56705 351 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 RUSC1-AS1Q66K80 236 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 LCN8Q6JVE9 175 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 ATP5L2Q7Z4Y8 100 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 RFLNBQ8N5W9 214 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 MBD3L1Q8WWY6 194 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 TMEM159Q96B96 161 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 ZNF354BQ96LW1 612 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 OR5M11Q96RB7 305 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 HIST1H4GQ99525 98 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 SERPINI1Q99574 410 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 TMEM126AQ9H061 195 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 ZNF629Q9UEG4 869 aaPredicted RBP4.82□□□□□ -1.64
CHD1-208ENST00000512392 FER1L5A0AVI2 2057 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 DENND4BO75064 1496 aaPredicted RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 A0A0G2JN53 185 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 LOC102725191A0A1B0GVB3 256 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 WI2-2373I1.2A0A1W2PRP0 233 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 FAM220BPB1ANY3 271 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 H7C1C5 153 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 HCRTR1O43613 425 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 KBTBD11O94819 623 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 TNFSF15O95150 251 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 HBZP02008 142 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 LCN6P62502 163 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 HIST1H1AQ02539 215 aaPredicted RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 TMEM267Q0VDI3 215 aaPredicted RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 DAZ2Q13117 558 aaKnown RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 SIX1Q15475 284 aaPredicted RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 OCIAD2Q56VL3 154 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 C1orf100Q5SVJ3 147 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 HAGHLQ6PII5 290 aaPredicted RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 SCGB1D4Q6XE38 83 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 Q6ZRU5 148 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 FAM19A3Q7Z5A8 133 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 DAZ4Q86SG3 579 aaKnown RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 ZNF433Q8N7K0 673 aaPredicted RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 SLC30A7Q8NEW0 376 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 OR5P3Q8WZ94 311 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 NARS2Q96I59 477 aaKnown RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 TMEM101Q96IK0 257 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 EBF2Q9HAK2 575 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 DAZ1Q9NQZ3 744 aaKnown RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 DAZ3Q9NR90 486 aaKnown RBP4.81□□□□□ -1.64
CHD1-208ENST00000512392 WASHC3Q9Y3C0 194 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 IGSF9BQ9UPX0 1349 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 VPS8Q8N3P4 1428 aa4.81□□□□□ -1.64
CHD1-208ENST00000512392 A0A1B0GX51 115 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 LINC01548A6NM66 108 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 SIGLEC16A6NMB1 481 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 ORM2P19652 201 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 SRIP30626 198 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 MDH2P40926 338 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 NCBP2P52298 156 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHD1-208ENST00000512392 SLC25A1P53007 311 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 CCL23P55773 120 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 GFERP55789 205 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 SNRPD2P62316 118 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 BTN1A1Q13410 526 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 RHEBQ15382 184 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 CNPY1Q3B7I2 92 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 C6orf99Q4VX62 202 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 IBA57Q5T440 356 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 ARL9Q6T311 187 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 TEX43Q6ZNM6 134 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 PRNTQ86SH4 94 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 OR13C8Q8NGS7 320 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 GEMIN6Q8WXD5 167 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 SLC35G5Q96KT7 338 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 GPR82Q96P67 336 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 SIGLEC12Q96PQ1 595 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 LRRC61Q9BV99 259 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 SMIM3Q9BZL3 60 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 RBM38Q9H0Z9 239 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 ZNF71Q9NQZ8 489 aaPredicted RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 PRTFDC1Q9NRG1 225 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 IGHV4OR15-8A0A075B7B6 117 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 APOA2P02652 100 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 SERPINE1P05121 402 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 LGALS1P09382 135 aaKnown RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 LAMP1P11279 417 aa4.8□□□□□ -1.64
CHD1-208ENST00000512392 SPRP35270 261 aaPredicted RBP4.8□□□□□ -1.64
CHD1-208ENST00000512392 ZNF138P52744 262 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms