RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 AGTRAPQ6RW13 159 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 GTF2H5Q6ZYL4 71 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 COX15Q7KZN9 410 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SLC16A9Q7RTY1 509 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 LHFPL4Q7Z7J7 247 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 VASH2Q86V25 355 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 NIT1Q86X76 327 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF683Q8IZ20 524 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SLC39A11Q8N1S5 342 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 TMEM156Q8N614 296 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF676Q8N7Q3 588 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 AMER3Q8N944 861 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 APCDD1LQ8NCL9 501 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 OR51D1Q8NGF3 324 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 OR5A2Q8NGI9 324 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 OR4S2Q8NH73 311 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 OR5AK3PQ8NH89 298 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 OR5K2Q8NHB8 316 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF563Q8TA94 476 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 RNF128Q8TEB7 428 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 TSLPQ969D9 159 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 TOMM40LQ969M1 308 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 FAM46BQ96A09 425 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ADIPOR1Q96A54 375 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF689Q96CS4 500 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 EID2BQ96D98 161 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 PCED1BQ96HM7 432 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 REEP6Q96HR9 211 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 TBX5Q99593 518 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 MCHR1Q99705 422 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SPIN2AQ99865 258 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 GABRG3Q99928 467 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SPIN2BQ9BPZ2 258 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ABHD6Q9BV23 337 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 PKIBQ9C010 78 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 CHST6Q9GZX3 395 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 CST9LQ9H4G1 147 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 MTHFD2LQ9H903 347 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 GPR84Q9NQS5 396 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 MRPL22Q9NWU5 206 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 CISD1Q9NZ45 108 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 FLRT3Q9NZU0 649 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 RAB22AQ9UL26 194 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 NPIPA1Q9UND3 350 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 DHDHQ9UQ10 334 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 VSIG4Q9Y279 399 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 WDR45Q9Y484 360 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 KIAA1671Q9BY89 1806 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF462Q96JM2 2506 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 KIF26AQ9ULI4 1882 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 IGLV3-16A0A075B6K0 115 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 SERTM2A0A1B0GWG4 89 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 DUXBA0A1W2PPF3 345 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF860A6NHJ4 632 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 OR5B21A6NL26 309 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 C17orf100A8MU93 164 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 TMEM250H0YL14 139 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 CORTO00230 105 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 TIMM23O14925 209 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 ARPC3O15145 178 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 FCMRO60667 390 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 MTX2O75431 263 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 CA11O75493 328 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 TXNDC12O95881 172 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 MT-CO2P00403 227 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 IGHEP01854 428 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 PCCBP05166 539 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 DBIP07108 87 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 IFI6P09912 130 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 OR4A8P0C604 315 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 OR4Q2P0C623 313 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 LAMP2P13473 410 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 CEACAM1P13688 526 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 HMGA1P17096 107 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 CSNK2A2P19784 350 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 TCN2P20062 427 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF10P21506 573 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 ANOS1P23352 680 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 CEACAM8P31997 349 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 GABRA3P34903 492 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 ACAA2P42765 397 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 TSFMP43897 325 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 NPBWR2P48146 333 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 CEBPDP49716 269 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 SLC25A1P53007 311 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 RND3P61587 244 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 CSNK1G2P78368 415 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 RBPJQ06330 500 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 ARL16Q0P5N6 197 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 EIF3IQ13347 325 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 FZD2Q14332 565 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 VAMP3Q15836 100 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 BATFQ16520 125 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 HIST3H3Q16695 136 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 PCK2Q16822 640 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 MPV17LQ2QL34 196 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 IAH1Q2TAA2 248 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 C2orf76Q3KRA6 126 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 LRRC10Q5BKY1 277 aa3.88□□□□□ -1.79
PDLIM5-211ENST00000508531 PRAMEF20Q5VT98 475 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms