RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 LIAT1Q6ZQX7 453 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 C8orf86Q6ZUL3 223 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 ORAI3Q9BRQ5 295 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 DUSP15Q9H1R2 295 aaPredicted RBP5.46□□□□□ -1.53
CLCN3-204ENST00000504131 C11orf68Q9H3H3 251 aaKnown RBP5.46□□□□□ -1.53
CLCN3-204ENST00000504131 ABRACLQ9P1F3 81 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 PCM1Q15154 2024 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 SPAARA0A1B0GVQ0 90 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 ZNF732B4DXR9 585 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 J3QLW9 94 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 K7EP34 96 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 RER1O15258 196 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 CTSBP07858 339 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 RPL27P61353 136 aaKnown RBP5.46□□□□□ -1.54
CLCN3-204ENST00000504131 PLK5Q496M5 336 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 TRNP1Q6NT89 227 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 Q6ZVH6 145 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 ZG16BQ96DA0 208 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 MRGPRX3Q96LB0 322 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 FAM231BA6NCW3 169 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 C3orf70A6NLC5 250 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-204ENST00000504131 H3BP45 60 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 RPL7P18124 248 aaKnown RBP5.46□□□□□ -1.54
CLCN3-204ENST00000504131 DUTP33316 252 aaKnown RBP5.46□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS3P35030 304 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 GLIPR1P48060 266 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 SYPL2Q5VXT5 272 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 DGAT2L7PQ6IED9 249 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 COMMD5Q9GZQ3 224 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 RNF186Q9NXI6 227 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 WRAP73Q9P2S5 460 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-204ENST00000504131 FOXA2Q9Y261 457 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-204ENST00000504131 TOGARAM1Q9Y4F4 1720 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 A0A0U1RQS6 177 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-204ENST00000504131 H3BTX0 84 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 LAMTOR5O43504 91 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 MIPP30301 263 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 P2RY6Q15077 328 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 HFE2Q6ZVN8 426 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 RASL11BQ9BPW5 248 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 MANBALQ9NQG1 85 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 CA10Q9NS85 328 aa5.46□□□□□ -1.54
CLCN3-204ENST00000504131 NUP188Q5SRE5 1749 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 A0A087WUJ7 227 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 PPIHO43447 177 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 CXorf1O96002 111 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 FCGR3AP08637 254 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 KIR2DS2P43631 304 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ATP4BP51164 291 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TBC1D28Q2M2D7 210 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 C6orf226Q5I0X4 101 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 RBPMS2Q6ZRY4 209 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 GATAD1Q8WUU5 269 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 XAGE5Q8WWM1 108 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 SMPXQ9UHP9 88 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 FCGR3BO75015 233 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 NAPSAO96009 420 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ELAVL4P26378 380 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 FCGR2CP31995 323 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 RPS23P62266 143 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 FABP5Q01469 135 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ZNF345Q14585 488 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 PAGE3Q5JUK9 113 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 FNDC7Q5VTL7 733 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS54Q6PEW0 395 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM64Q6YI46 380 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS45Q7RTY3 260 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ATP5L2Q7Z4Y8 100 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM150AQ86TG1 271 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ZNF101Q8IZC7 436 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 KREMEN2Q8NCW0 462 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 NEUROG1Q92886 237 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 C18orf15Q96N68 181 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MCTS1Q9ULC4 181 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 C10orf71Q711Q0 1435 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ROBO3Q96MS0 1386 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 UPK3BL1B0FP48 263 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM229AB2RXF0 380 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 UPK3BL2E5RIL1 263 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM50AO95807 157 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 SMIM10L1P0DMW3 83 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 RPS4Y1P22090 263 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 HOXD9P28356 352 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 PPIFP30405 207 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 CDKN2BP42772 138 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 VEGFBP49765 207 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 SNRPFP62306 86 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 LTBQ06643 244 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ZNF79Q15937 498 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MPV17L2Q567V2 206 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TCTN3Q6NUS6 607 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MRGPREQ86SM8 312 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ABHD5Q8WTS1 349 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 SMIM10Q96HG1 83 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 HEXA-AS1Q9H8Q6 139 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ISG20L2Q9H9L3 353 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 COL5A3P25940 1745 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 FOXI3A8MTJ6 420 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS46E5RG02 174 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms