RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SRSF8Q9BRL6 282 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 SF3B5Q9BWJ5 86 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 STRADBQ9C0K7 418 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 TOLLIPQ9H0E2 274 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 TMEM222Q9H0R3 208 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CDH20Q9HBT6 801 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 LYRM2Q9NU23 88 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 SOHLH2Q9NX45 425 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 GSKIPQ9P0R6 139 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 RNF115Q9Y4L5 304 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CHCHD2Q9Y6H1 151 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 COL27A1Q8IZC6 1860 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 NCOR1O75376 2440 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 hCG_1809904A0A1W2PP81 198 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 A0A1W2PPE2 198 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 A0A1W2PR64 198 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 A0A1W2PRV1 198 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 MKRN2OSH3BPM6 223 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 MPPED1O15442 326 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 NME2P1O60361 137 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SS18L1O75177 396 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 SFTPDP35247 375 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 PPP1CCP36873 323 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 GPX4P36969 197 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 CAMLGP49069 296 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 MFAP4P55083 255 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 OR1D5P58170 312 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SSTP61278 116 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SHBQ15464 509 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 OR8G1Q15617 311 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 ZNF674Q2M3X9 581 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 PYY3Q5JQD4 70 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 KRBOX4Q5JUW0 171 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 COLCA1Q6ZS62 124 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 Q6ZWC4 215 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 HIST3H2BBQ8N257 126 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 FAM24BQ8N5W8 94 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CCDC71LQ8N9Z2 235 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CPEB3Q8NE35 698 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 RBMXL1Q96E39 390 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 FBXO17Q96EF6 278 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 DNAJA3Q96EY1 480 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 AGMATQ9BSE5 352 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SH3BGRL3Q9H299 93 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 ZNF160Q9HCG1 818 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 KCNJ16Q9NPI9 418 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SLC2A9Q9NRM0 540 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CISD1Q9NZ45 108 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 LSM5Q9Y4Y9 91 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 MMP24Q9Y5R2 645 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 TRBV24-1A0A075B6N3 115 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 hCG_38984A0A1B0GV85 526 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 OR5H15A6NDH6 313 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 NPIPB11E5RHQ5 1161 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 H3BQ15 152 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 TLX3O43711 291 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 GMFGO60234 142 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 ZIC3O60481 467 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 ZFAND5O76080 213 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 NAPSAO96009 420 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CXCL1P09341 107 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 NQO2P16083 231 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 HIST1H1BP16401 226 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 KLK2P20151 261 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 ATP6V0CP27449 155 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 GNRHRP30968 328 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 HAAOP46952 286 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 B3GALT5-AS1P59052 145 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 HNRNPKP61978 463 aaKnown RBP eCLIP3.33□□□□□ -1.88
CLTC-209ENST00000498711 ZNF92Q03936 586 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 IL24Q13007 206 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 ZNF266Q14584 549 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 RSU1Q15404 277 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 HAGHQ16775 308 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SERTAD4-AS1Q5TG53 156 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 VWA1Q6PCB0 445 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CPEB2Q7Z5Q1 589 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 TMEM252Q8N6L7 170 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 OR5D13Q8NGL4 314 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 OR5R1Q8NH85 324 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SLC22A8Q8TCC7 542 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 Q8WTZ3 238 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 PIGTQ969N2 578 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 RAB39BQ96DA2 213 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 GNPNAT1Q96EK6 184 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 TVP23CQ96ET8 276 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 TP53RKQ96S44 253 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 RARRES2Q99969 163 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 HDHD3Q9BSH5 251 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 FAAP24Q9BTP7 215 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SLC25A31Q9H0C2 315 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CALHM2Q9HA72 323 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 PLEKHJ1Q9NW61 149 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 PIGLQ9Y2B2 252 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 MRPS18CQ9Y3D5 142 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 C3orf85A0A1B0GTC6 90 aa3.32□□□□□ -1.88
CLTC-209ENST00000498711 AGPAT2O15120 278 aa3.32□□□□□ -1.88
CLTC-209ENST00000498711 PDCD6O75340 191 aa3.32□□□□□ -1.88
CLTC-209ENST00000498711 HBE1P02100 147 aa3.32□□□□□ -1.88
CLTC-209ENST00000498711 ARG1P05089 322 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms