RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 KHDC3LQ587J8 217 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 AKR1C8PQ5T2L2 129 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 PLPPR1Q8TBJ4 325 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 GNPNAT1Q96EK6 184 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-206ENST00000498614 SIGLEC12Q96PQ1 595 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 SPIN2AQ99865 258 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 SPIN2BQ9BPZ2 258 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 FOXJ2Q9P0K8 574 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 FREM1Q5H8C1 2179 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 FRYQ5TBA9 3013 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 C9orf172C9J069 976 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 RPL36A-HNRNPH2H7BZ11 118 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 TM4SF5O14894 197 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 MRPL33O75394 65 aaKnown RBP14.02□□□□□ -0.17
COL6A1-206ENST00000498614 CCL2P13500 99 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 NPBWR2P48146 333 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 ZNF818PQ6ZRF7 136 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 SLC35E3Q7Z769 313 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 CMTM1Q8IZ96 169 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 IL36GQ9NZH8 169 aa14.02□□□□□ -0.17
COL6A1-206ENST00000498614 BOKQ9UMX3 212 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-206ENST00000498614 PPP1R2P9O14990 202 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 FUT3P21217 361 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 NKX6-1P78426 367 aaPredicted RBP14.01□□□□□ -0.17
COL6A1-206ENST00000498614 SLC25A26Q70HW3 274 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 FAM185AQ8N0U4 392 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 GAPTQ8N292 157 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 IL22RA1Q8N6P7 574 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 ZNF611Q8N823 705 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 ABHD5Q8WTS1 349 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 MRPS18CQ9Y3D5 142 aaKnown RBP14.01□□□□□ -0.17
COL6A1-206ENST00000498614 CHST1O43916 411 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 HIST1H1BP16401 226 aaKnown RBP14.01□□□□□ -0.17
COL6A1-206ENST00000498614 HLA-DRB3P79483 266 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 ARF1P84077 181 aaKnown RBP14.01□□□□□ -0.17
COL6A1-206ENST00000498614 NMSQ5H8A3 153 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 OR2T2Q6IF00 324 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 OR2M7Q8NG81 312 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 GFOD1Q9NXC2 390 aa14.01□□□□□ -0.17
COL6A1-206ENST00000498614 NEURL1O76050 574 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 TRGC1P0CF51 173 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 CEACAM1P13688 526 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 FOXG1P55316 489 aaPredicted RBP14□□□□□ -0.17
COL6A1-206ENST00000498614 ID3Q02535 119 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 TLE4Q04727 773 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 FRZBQ92765 325 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 RBMXL1Q96E39 390 aaKnown RBP14□□□□□ -0.17
COL6A1-206ENST00000498614 C14orf144Q96I85 54 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 C1QTNF5Q9BXJ0 243 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 AKAP13Q12802 2813 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 IGKV1D-13A0A0B4J2D9 117 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 LOC102723971A0A1B0GUV8 181 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 FAM166BA8MTA8 275 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 TNFSF15O95150 251 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 IGKV1-13P0DP09 117 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 PAX9P55771 341 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 TUSC5Q8IXB3 177 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 TMEM45BQ96B21 275 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 S100PBPQ96BU1 408 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 ZNF703Q9H7S9 590 aaPredicted RBP14□□□□□ -0.17
COL6A1-206ENST00000498614 CRIM1Q9NZV1 1036 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 GNG13Q9P2W3 67 aa14□□□□□ -0.17
COL6A1-206ENST00000498614 GFRA3O60609 400 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 HLA-HP01893 362 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 SCTP09683 121 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 LHX2P50458 406 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 BAXQ07812 192 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 GAMTQ14353 236 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 OR56B2PQ8NGI1 322 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 EXTL1Q92935 676 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 SPSB4Q96A44 273 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 ABHD14BQ96IU4 210 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 FAM210BQ96KR6 192 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 ATP5SQ99766 215 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 PRDM14Q9GZV8 571 aa13.99□□□□□ -0.17
COL6A1-206ENST00000498614 ELOA3CA0A087WX78 387 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-206ENST00000498614 HBE1P02100 147 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 FABP4P15090 132 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 CD200P41217 278 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 TAS2R30P59541 319 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 RAB11AP62491 216 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 C4orf17Q53FE4 359 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 FAM90A2PQ658T7 463 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 OR13D1Q8NGV5 346 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 FAM173AQ9BQD7 235 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 PLA2G3Q9NZ20 509 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 CLEC18AA5D8T8 446 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 SLC22A20A6NK97 555 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 OR5H1A6NKK0 313 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 MAGEA5P43359 124 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 ABHD17BQ5VST6 288 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 THNSL2Q86YJ6 484 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 CLEC18CQ8NCF0 446 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 ZPBPQ9BS86 351 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 TAAR3PQ9P1P4 343 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 RNF115Q9Y4L5 304 aa13.98□□□□□ -0.17
COL6A1-206ENST00000498614 C5orf49A4QMS7 147 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 ZNF503-AS2A6NEH8 195 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 H3BP45 60 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms