RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 POLR2GP62487 172 aaKnown RBP eCLIP11.02□□□□□ -0.65
GARNL3-220ENST00000496711 TAGLNQ01995 201 aaKnown RBP11.02□□□□□ -0.65
GARNL3-220ENST00000496711 NHLH2Q02577 135 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 TESK1Q15569 626 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF718Q3SXZ3 478 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 MBNL2Q5VZF2 373 aaKnown RBP11.02□□□□□ -0.65
GARNL3-220ENST00000496711 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 OR51H1Q8NH63 302 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 AKR1E2Q96JD6 320 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 TSNAXQ99598 290 aaKnown RBP11.02□□□□□ -0.65
GARNL3-220ENST00000496711 HEATR1Q9H583 2144 aaKnown RBP11.02□□□□□ -0.65
GARNL3-220ENST00000496711 FAM212BQ9NTI7 297 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-220ENST00000496711 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-220ENST00000496711 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 TMEM30CPA0ZSE6 113 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 A6NLC8 198 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 TM4SF5O14894 197 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 MMP9P14780 707 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 ADCYAP1P18509 176 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
GARNL3-220ENST00000496711 VAMP2P63027 116 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 SRSF3P84103 164 aaKnown RBP11.01□□□□□ -0.65
GARNL3-220ENST00000496711 PRAMEF6Q5VXH4 476 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 BTNL8Q6UX41 500 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 Q6ZR03 302 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 Q6ZS92 163 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF826PQ6ZT77 177 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 C11orf53Q8IXP5 236 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 NKX6-2Q9C056 277 aaPredicted RBP11.01□□□□□ -0.65
GARNL3-220ENST00000496711 TREM1Q9NP99 234 aa11.01□□□□□ -0.65
GARNL3-220ENST00000496711 SVILO95425 2214 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 KIAA2026Q5HYC2 2103 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 IGSF23A1L1A6 192 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 FAM24AA6NFZ4 105 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 C1QTNF9BB2RNN3 333 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 TSPAN4O14817 238 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 WNT9BO14905 357 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 PITX3O75364 302 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 IGLV2-14P01704 120 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 SERPINE2P07093 398 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 SPP1P10451 314 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 PSG2P11465 335 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 LMO1P25800 156 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 NBL1P41271 181 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 FABP6P51161 128 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 ID3Q02535 119 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF273Q14593 569 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 EIF2S3LQ2VIR3 472 aaKnown RBP11□□□□□ -0.65
GARNL3-220ENST00000496711 CXorf66Q5JRM2 361 aaPredicted RBP11□□□□□ -0.65
GARNL3-220ENST00000496711 WDR82Q6UXN9 313 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 ACP7Q6ZNF0 438 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 SPAG16Q8N0X2 631 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 SLC25A31Q9H0C2 315 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 MAGT1Q9H0U3 335 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 TMEM231Q9H6L2 316 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 PLEKHF2Q9H8W4 249 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 LIN7CQ9NUP9 197 aaKnown RBP11□□□□□ -0.65
GARNL3-220ENST00000496711 KCNIP1Q9NZI2 227 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 KCNS2Q9ULS6 477 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 FZR1Q9UM11 496 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 CARHSP1Q9Y2V2 147 aaKnown RBP11□□□□□ -0.65
GARNL3-220ENST00000496711 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 PRR14LQ5THK1 2151 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF292O60281 2723 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 LOC105371267A0A1B0GV96 52 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 F8W036 122 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 PSPNO60542 156 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 SLC25A6P12236 298 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 ARHGDIBP52566 201 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 ZNF266Q14584 549 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 C10orf91Q5T1B1 145 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 SVBPQ8N300 66 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 UBALD1Q8TB05 177 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 UQCC1Q9NVA1 299 aa11□□□□□ -0.65
GARNL3-220ENST00000496711 RBM7Q9Y580 266 aaKnown RBP11□□□□□ -0.65
GARNL3-220ENST00000496711 WRBO00258 174 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 HEXAP06865 529 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 DANCRP0C864 163 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 MUC1P15941 1255 aaPredicted RBP10.99□□□□□ -0.65
GARNL3-220ENST00000496711 MZT1Q08AG7 82 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 SMIM21Q3B7S5 101 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 C1orf185Q5T7R7 199 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 SLC35E4Q6ICL7 350 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 HSD17B11Q8NBQ5 300 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 LYPD6BQ8NI32 183 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 RNASE11Q8TAA1 199 aaKnown RBP10.99□□□□□ -0.65
GARNL3-220ENST00000496711 PRR7Q8TB68 274 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 MSL2Q9HCI7 577 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 LUZP4Q9P127 313 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 FAM96BQ9Y3D0 163 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 FAM215AQ9Y5M1 114 aa10.99□□□□□ -0.65
GARNL3-220ENST00000496711 A0A0G2JRQ6 117 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 A0A1B0GU03 582 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 A0A1B0GWJ7 208 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 LOC400499M0QZD8 3231 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 DNASE2O00115 360 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-220ENST00000496711 KLK10O43240 276 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 EPHA1P21709 976 aa10.98□□□□□ -0.65
GARNL3-220ENST00000496711 CEACAM6P40199 344 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms