RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 LY6G6DO95868 133 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 HBZP02008 142 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 GUCA2AQ02747 115 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 TMEM30BQ3MIR4 351 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 OR52W1Q6IF63 320 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 CLEC9AQ6UXN8 241 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 VMO1Q7Z5L0 202 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 IFT46Q9NQC8 304 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 SESN1Q9Y6P5 492 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 A8MV72 311 aaPredicted RBP17.83■□□□□ 0.45
C9orf3-222ENST00000496567 OMGP23515 440 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 FPR2P25090 351 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 PRAMEF5Q5TYX0 476 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 FCAMRQ8WWV6 532 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 S100ZQ8WXG8 99 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 MAFIPQ8WZ33 124 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 GALMQ96C23 342 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 V9GYH0 126 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 MAST4O15021 2626 aa17.83■□□□□ 0.45
C9orf3-222ENST00000496567 HIVEP1P15822 2718 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 CSPG4Q6UVK1 2322 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 GABARAPH6UMI1 98 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 F2RL2O00254 374 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 NCR3LG1Q68D85 454 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 HOGA1Q86XE5 327 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 TEX29Q8N6K0 151 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 OR1L1Q8NH94 360 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 UPRTQ96BW1 309 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 KIRREL1Q96J84 757 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 TBX15Q96SF7 602 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 HEXA-AS1Q9H8Q6 139 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 SIRT7Q9NRC8 400 aa17.83■□□□□ 0.44
C9orf3-222ENST00000496567 MEIS3P1A6NDR6 274 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 FABP7O15540 132 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 MMP23AO75900 390 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 HTD2P86397 168 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 ZNF782Q6ZMW2 699 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-222ENST00000496567 GVQW1Q8N7I0 195 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 BEST4Q8NFU0 473 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 OR52M1Q8NGK5 317 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 OR4A4PQ8NGN8 299 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 UBALD1Q8TB05 177 aa17.82■□□□□ 0.44
C9orf3-222ENST00000496567 SCTP09683 121 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 ZNF45Q02386 682 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 ZNF846Q147U1 533 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 PYDC2Q56P42 97 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 OR13D1Q8NGV5 346 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 OR52I2Q8NH67 350 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 SMIM4Q8WVI0 70 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 IL1F10Q8WWZ1 152 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 TMEM133Q9H2Q1 129 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 TMEM160Q9NX00 188 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 ANAPC10Q9UM13 185 aa17.81■□□□□ 0.44
C9orf3-222ENST00000496567 SDCBPO00560 298 aaPredicted RBP17.8■□□□□ 0.44
C9orf3-222ENST00000496567 RBBP9O75884 186 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 DIRAS3O95661 229 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 AVPP01185 164 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 NFYBP25208 207 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 ACTBP60709 375 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 ACTG1P63261 375 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 LTC4SQ16873 150 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 STEAP3Q658P3 488 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 TNFRSF14Q92956 283 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 OR2S2Q9NQN1 319 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 ANXA10Q9UJ72 324 aa17.8■□□□□ 0.44
C9orf3-222ENST00000496567 J3QRK9 145 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 GSTZ1O43708 216 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-222ENST00000496567 GSTT2P0CG29 244 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 GSTT2BP0CG30 244 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 RCVRNP35243 200 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 GDNFP39905 211 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 DGCR2P98153 550 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 SSBP1Q04837 148 aaKnown RBP17.79■□□□□ 0.44
C9orf3-222ENST00000496567 RNASE12Q5GAN4 147 aaKnown RBP17.79■□□□□ 0.44
C9orf3-222ENST00000496567 LHX4Q969G2 390 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 SUCNR1Q9BXA5 334 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 WDR12Q9GZL7 423 aaKnown RBP17.79■□□□□ 0.44
C9orf3-222ENST00000496567 GNG12Q9UBI6 72 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 MTFP1Q9UDX5 166 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 JPT1Q9UK76 154 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 IGKV1D-8A0A087WSZ0 117 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 A0A087X0M5 115 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 A0A1B0GX30 115 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 CTXN2P0C2S0 81 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 HOXB4P17483 251 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-222ENST00000496567 NAT1P18440 290 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 LOXL3P58215 753 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 ARPC4P59998 168 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 ZNF79Q15937 498 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 C1orf229Q6ZS94 237 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-222ENST00000496567 C5orf24Q7Z6I8 188 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 NANPQ8TBE9 248 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 GFOD1Q9NXC2 390 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 KLK11Q9UBX7 282 aa17.79■□□□□ 0.44
C9orf3-222ENST00000496567 HNF1AP20823 631 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 ZBTB25P24278 435 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 CD34P28906 385 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 DLX1P56177 255 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 CHRFAM7AQ494W8 412 aa17.78■□□□□ 0.44
C9orf3-222ENST00000496567 FAM120AOSQ5T036 256 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms