RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 IL2RGP31785 369 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 GLRXP35754 106 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 CD200P41217 278 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 GATA4P43694 442 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 FABP6P51161 128 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 ERVS71-1P61550 626 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 ERVK11-1P61568 191 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 VAMP2P63027 116 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 SUPT4H1P63272 117 aaKnown RBP5.87□□□□□ -1.47
USP39-219ENST00000496047 CATR1Q13166 79 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 TMEM187Q14656 261 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 GGNBP1Q5YKI7 109 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 ZNF880Q6PDB4 577 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 ALKAL2Q6UX46 152 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 MEX3BQ6ZN04 569 aaKnown RBP5.87□□□□□ -1.47
USP39-219ENST00000496047 MYPOPQ86VE0 399 aaPredicted RBP5.87□□□□□ -1.47
USP39-219ENST00000496047 FAM71E2Q8N5Q1 922 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 ZBTB34Q8NCN2 500 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 OR11L1Q8NGX0 322 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 FAM216AQ8WUB2 273 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 S100PBPQ96BU1 408 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 AQP10Q96PS8 301 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 DIRC2Q96SL1 478 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 FGF23Q9GZV9 251 aaPredicted RBP5.87□□□□□ -1.47
USP39-219ENST00000496047 TLNRD1Q9H1K6 362 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 TMEM165Q9HC07 324 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 LUZP4Q9P127 313 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 TUBD1Q9UJT1 453 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 TINAGQ9UJW2 476 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 KCNS2Q9ULS6 477 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 OR2W1Q9Y3N9 320 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 LSM5Q9Y4Y9 91 aaKnown RBP5.87□□□□□ -1.47
USP39-219ENST00000496047 FAM215AQ9Y5M1 114 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 DOCK11Q5JSL3 2073 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 DSCAMO60469 2012 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 TRAV24A0A0B4J272 114 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 NUDT19A8MXV4 375 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 H0Y980 276 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 C16orf97H3BN30 126 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 FAM229AH3BQW9 127 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 SLC33A1O00400 549 aaPredicted RBP5.86□□□□□ -1.47
USP39-219ENST00000496047 HSD17B6O14756 317 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 MPPED1O15442 326 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 ST8SIA3O43173 380 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 ZNHIT1O43257 154 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 SERPINE2P07093 398 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 SCTP09683 121 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 GLI4P10075 376 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 RPS2P15880 293 aaKnown RBP5.86□□□□□ -1.47
USP39-219ENST00000496047 BMP5P22003 454 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 PTAFRP25105 342 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 GABRA2P47869 451 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 RAB32Q13637 225 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 SNTB1Q13884 538 aaKnown RBP5.86□□□□□ -1.47
USP39-219ENST00000496047 HMGN3Q15651 99 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 TBR1Q16650 682 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 IGSF11Q5DX21 431 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 TMEM268Q5VZI3 342 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 SLC35E4Q6ICL7 350 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 Q6P435 159 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 ACP7Q6ZNF0 438 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 ZNF497Q6ZNH5 498 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 SEM1Q6ZVN7 128 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 TBC1D26Q86UD7 250 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 H1FOOQ8IZA3 346 aaPredicted RBP5.86□□□□□ -1.47
USP39-219ENST00000496047 OR2Z1Q8NG97 314 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 OR10V1Q8NGI7 309 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 STOML3Q8TAV4 291 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 LRRC29Q8WV35 223 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 IL1F10Q8WWZ1 152 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 RND1Q92730 232 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 ERGIC1Q969X5 290 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 GALMQ96C23 342 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 PLPPR2Q96GM1 343 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 ZNF488Q96MN9 340 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 SLC25A31Q9H0C2 315 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 TMEM222Q9H0R3 208 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 PLEKHF2Q9H8W4 249 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 HES4Q9HCC6 221 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 MED9Q9NWA0 146 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 CRIM1Q9NZV1 1036 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 DUSP13Q9UII6 198 aa5.86□□□□□ -1.47
USP39-219ENST00000496047 DIDO1Q9BTC0 2240 aaKnown RBP5.86□□□□□ -1.47
USP39-219ENST00000496047 RNF222A6NCQ9 220 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 A8MXE2 369 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 F8W735 103 aaPredicted RBP5.85□□□□□ -1.47
USP39-219ENST00000496047 I3L521 148 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 J3QKU1 62 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 MLNRO43193 412 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 SPINT2O43291 252 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 GPR137BO60478 399 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 DEDDO75618 318 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 TUSC2O75896 110 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 JTBO76095 146 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 IGHV3-13P01766 116 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 RRASP10301 218 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 ZNF250P15622 560 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 VDAC1P21796 283 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 LMO1P25800 156 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 RPL12P30050 165 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms