RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 Q96M66 194 aa11.32□□□□□ -0.6
RPRD1B-206ENST00000495457 OR4F4Q96R69 305 aa11.32□□□□□ -0.6
RPRD1B-206ENST00000495457 TMED9Q9BVK6 235 aa11.32□□□□□ -0.6
RPRD1B-206ENST00000495457 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
RPRD1B-206ENST00000495457 SPACA1Q9HBV2 294 aa11.32□□□□□ -0.6
RPRD1B-206ENST00000495457 TRAPPC2LQ9UL33 140 aa11.32□□□□□ -0.6
RPRD1B-206ENST00000495457 LSM2Q9Y333 95 aaKnown RBP11.32□□□□□ -0.6
RPRD1B-206ENST00000495457 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 UBE2QL1A1L167 161 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 M0QZK8 103 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 CCRL2O00421 344 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 PRB2P02812 416 aaPredicted RBP11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 RCC1P18754 421 aaPredicted RBP11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 MAPK3P27361 379 aaPredicted RBP11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 ZNF816Q0VGE8 651 aaPredicted RBP11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 RNLSQ5VYX0 342 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 UNQ9370/PRO34162Q6UXP9 181 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 C5orf24Q7Z6I8 188 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 MOB3BQ86TA1 216 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 GAPTQ8N292 157 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 C5orf56Q8N8D9 126 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 MYDGFQ969H8 173 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 RBMXL1Q96E39 390 aaKnown RBP11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 UQCC2Q9BRT2 126 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 TGP01266 2768 aa11.31□□□□□ -0.6
RPRD1B-206ENST00000495457 TCRBV4S1A1TA0A5B7 111 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 HBZP02008 142 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 GAPDHP04406 335 aaKnown RBP11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 GPR50Q13585 617 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 SPHARQ15513 63 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 MED22Q15528 200 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 KPRPQ5T749 579 aaPredicted RBP11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 OR10K2Q6IF99 312 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 LRRTM1Q86UE6 522 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 LINC00311Q8N616 119 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 OR10V1Q8NGI7 309 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 OR1L1Q8NH94 360 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 THRSPQ92748 146 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 SCN3BQ9NY72 215 aa11.3□□□□□ -0.6
RPRD1B-206ENST00000495457 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 FAM90A7PA6NKC0 464 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 FAM90A23PA8MXZ1 464 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 H0YHG0 523 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 SPINT2O43291 252 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 SC5DO75845 299 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 MPIG6BO95866 241 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 PF4V1P10720 104 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 FUT3P21217 361 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 ZNF134P52741 427 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 SLC35A2P78381 396 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 IRF3Q14653 427 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 NKAPLQ5M9Q1 402 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 RBM48Q5RL73 367 aaKnown RBP11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 C6orf183Q5T699 404 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 CEACAM19Q7Z692 300 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 C8orf31Q8N9H6 132 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 ZNF439Q8NDP4 499 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 OR4X2Q8NGF9 303 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 RTN4IP1Q8WWV3 396 aaPredicted RBP11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 ST6GALNAC6Q969X2 333 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 NOL4LQ96MY1 436 aaPredicted RBP11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 KCNK15Q9H427 330 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 GNG12Q9UBI6 72 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 LINC00527Q9UJ94 153 aa11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
RPRD1B-206ENST00000495457 PSMB11A5LHX3 300 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 ZNF736B4DX44 427 aaPredicted RBP11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 FGF16O43320 207 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 PDCD6O75340 191 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 VSIG8P0DPA2 414 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 EBI3Q14213 229 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 LIPKQ5VXJ0 399 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 SLC25A48Q6ZT89 311 aaKnown RBP11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 MRPL30Q8TCC3 161 aaKnown RBP11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 TMEM203Q969S6 136 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 CST11Q9H112 138 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 TAF9BQ9HBM6 251 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 MBNL3Q9NUK0 354 aaKnown RBP11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
RPRD1B-206ENST00000495457 LINC01548A6NM66 108 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 SERPINE3A8MV23 424 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 CA11O75493 328 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 GLAP06280 429 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 SRMP19623 302 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 MYF6P23409 242 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 IL3RAP26951 378 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 GNMTQ14749 295 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 Q3ZCU0 254 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 HSD17B12Q53GQ0 312 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 GLT8D1Q68CQ7 371 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
RPRD1B-206ENST00000495457 Q8N6K4 173 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms