RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SLC25A6P12236 298 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 CYP2G1PQ6ZSU1 146 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 PIGCQ92535 297 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 C20orf204Q6ZNR8 217 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 BEND4Q6ZU67 534 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 MRGPRGQ86SM5 289 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 TGIF2LYQ8IUE0 185 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 SPSB4Q96A44 273 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 POM121Q96HA1 1249 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 ELOVL1Q9BW60 279 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A10PA6NDY2 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A18PA6NE21 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A16PA6NEW6 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A20PA6NIJ5 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A8PA6NJQ4 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A7PA6NKC0 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A22PA8MWA6 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A12PA8MX19 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A5PA8MXJ8 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A23PA8MXZ1 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 TNFSF11O14788 317 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 IGLV2-14P01704 120 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A15PP0C7V4 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A13PP0C7W8 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A14PP0C7W9 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 FAM90A24PP0C7X0 464 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 B4GALT1P15291 398 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 F2RP25116 425 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 LTBRP36941 435 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 MDH2P40926 338 aaKnown RBP13.1□□□□□ -0.31
SDF4-207ENST00000494748 RPS18P62269 152 aaKnown RBP13.1□□□□□ -0.31
SDF4-207ENST00000494748 LRRC75BQ2VPJ9 315 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 TCAPO15273 167 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 IFNA5P01569 189 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 LIFP15018 202 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 LURAP1Q96LR2 239 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 AKIRIN1Q9H9L7 192 aaPredicted RBP13.1□□□□□ -0.31
SDF4-207ENST00000494748 NAT8Q9UHE5 227 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 ZNF391Q9UJN7 358 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 GAB2Q9UQC2 676 aa13.1□□□□□ -0.31
SDF4-207ENST00000494748 ZNF816-ZNF321PA0A0X1KG74 233 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 CEBPZOSA8MTT3 80 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 GCGP01275 180 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 OR4A8P0C604 315 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 NUBP1P53384 320 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 RPL23P62829 140 aaKnown RBP13.09□□□□□ -0.31
SDF4-207ENST00000494748 SHHQ15465 462 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 TMEM170AQ8WVE7 144 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 RAB40CQ96S21 281 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 OR2H1Q9GZK4 316 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 CCL3P10147 92 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 ACTL10Q5JWF8 245 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 ZNF324BQ6AW86 544 aaPredicted RBP13.09□□□□□ -0.31
SDF4-207ENST00000494748 UBE2ZQ9H832 354 aaPredicted RBP13.09□□□□□ -0.31
SDF4-207ENST00000494748 WASF3Q9UPY6 502 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 IFNL4K9M1U5 179 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 PSG2P11465 335 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 ERVS71-1P61550 626 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 TMEM41BQ5BJD5 291 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 OR6C1Q96RD1 312 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 IER2Q9BTL4 223 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 LAMP3Q9UQV4 416 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 ATP23Q9Y6H3 246 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 FREM2Q5SZK8 3169 aa13.09□□□□□ -0.31
SDF4-207ENST00000494748 WNT2P09544 360 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 PRSS50Q9UI38 385 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 KBTBD11O94819 623 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 METTL15P1P0C7V9 234 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 SLC10A1Q14973 349 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 RTP5Q14D33 572 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 RAET1LQ5VY80 246 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 NCR3LG1Q68D85 454 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 ALKBH3Q96Q83 286 aaPredicted RBP13.08□□□□□ -0.32
SDF4-207ENST00000494748 SNHG12Q9BXW3 62 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 PARD6GQ9BYG4 376 aaPredicted RBP13.08□□□□□ -0.32
SDF4-207ENST00000494748 DEFB126Q9BYW3 111 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 SH2D2AQ9NP31 389 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 SDK2Q58EX2 2172 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 MAP1LC3B2A6NCE7 125 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 B4E171 279 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 C2CD4DB7Z1M9 353 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 SCRG1O75711 98 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 TSPAN7P41732 249 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 FGF12P61328 243 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 GNB2P62879 340 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 ADIRFQ15847 76 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 RPP25LQ8N5L8 163 aaKnown RBP13.08□□□□□ -0.32
SDF4-207ENST00000494748 TSTD1Q8NFU3 115 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 MRPL30Q8TCC3 161 aaKnown RBP13.08□□□□□ -0.32
SDF4-207ENST00000494748 ADGRG7Q96K78 797 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 TECTBQ96PL2 329 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 MAP1LC3BQ9GZQ8 125 aa13.08□□□□□ -0.32
SDF4-207ENST00000494748 WDR61Q9GZS3 305 aaKnown RBP13.08□□□□□ -0.32
SDF4-207ENST00000494748 LRRC3CA6NJW4 275 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 ZNF716A6NP11 495 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms