RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 LINC01548A6NM66 108 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 M0QZK8 103 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 AIPO00170 330 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 CCRL2O00421 344 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 HSD17B6O14756 317 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 MYL12BO14950 172 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 SLC31A2O15432 143 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 CRTAPO75718 401 aaPredicted RBP7.61□□□□□ -1.19
MSH5-218ENST00000494646 GAPDHP04406 335 aaKnown RBP7.61□□□□□ -1.19
MSH5-218ENST00000494646 WNT4P56705 351 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 PAX5Q02548 391 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 GPR176Q14439 515 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 KPRPQ5T749 579 aaPredicted RBP7.61□□□□□ -1.19
MSH5-218ENST00000494646 OGFRL1Q5TC84 451 aaPredicted RBP7.61□□□□□ -1.19
MSH5-218ENST00000494646 AWAT2Q6E213 333 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 RAB12Q6IQ22 244 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 ZNF497Q6ZNH5 498 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 SLC16A12Q6ZSM3 486 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 LINC00596Q86U02 117 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 TMEM104Q8NE00 496 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 OR4X2Q8NGF9 303 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 OR10V1Q8NGI7 309 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 DERL3Q96Q80 235 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 C8orf4Q9NR00 106 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 PLCXD1Q9NUJ7 323 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 GFOD1Q9NXC2 390 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 ETAA1Q9NY74 926 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 CNOT2Q9NZN8 540 aaKnown RBP7.61□□□□□ -1.19
MSH5-218ENST00000494646 IGHV1-3A0A0C4DH29 117 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 TMEM238LA0A1B0GVL6 79 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 NCBP2LA6PVI3 153 aaKnown RBP7.6□□□□□ -1.19
MSH5-218ENST00000494646 SERPINE3A8MV23 424 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 ZNF736B4DX44 427 aaPredicted RBP7.6□□□□□ -1.19
MSH5-218ENST00000494646 C12orf77C9JDV5 145 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 CASQ2O14958 399 aaPredicted RBP7.6□□□□□ -1.19
MSH5-218ENST00000494646 ORC5O43913 435 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 RCC1P18754 421 aaPredicted RBP7.6□□□□□ -1.19
MSH5-218ENST00000494646 ZNF134P52741 427 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 LOXL3P58215 753 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 ACSM3Q53FZ2 586 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 FOXB2Q5VYV0 432 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 OR8H3Q8N146 312 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 C5orf56Q8N8D9 126 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 WFDC9Q8NEX5 89 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 OR52M1Q8NGK5 317 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 OR1L1Q8NH94 360 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 MRAPQ8TCY5 172 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 FAM46BQ96A09 425 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 PHF21AQ96BD5 680 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 NKX1-2Q9UD57 310 aaPredicted RBP7.6□□□□□ -1.19
MSH5-218ENST00000494646 ERGIC3Q9Y282 383 aa7.6□□□□□ -1.19
MSH5-218ENST00000494646 SPINT2O43291 252 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 HBZP02008 142 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 MGMTP16455 207 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 FSTP19883 344 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 FUT3P21217 361 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 GP2P55259 537 aaKnown RBP7.59□□□□□ -1.19
MSH5-218ENST00000494646 TAS2R43P59537 309 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 GABPB1Q06547 395 aaPredicted RBP7.59□□□□□ -1.19
MSH5-218ENST00000494646 ZNF816Q0VGE8 651 aaPredicted RBP7.59□□□□□ -1.19
MSH5-218ENST00000494646 CT45A1Q5HYN5 189 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 FAM27D1Q5T7N8 215 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 SIGIRRQ6IA17 410 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 OR10K2Q6IF99 312 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 UNQ9370/PRO34162Q6UXP9 181 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 Q6ZPA2 131 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 C18orf65Q6ZTR6 163 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 LYPD6Q86Y78 171 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 LINC00311Q8N616 119 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 OR52L2PQ8NGH6 319 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 OR2T10Q8NGZ9 312 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 CT45A3Q8NHU0 189 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 FBLIM1Q8WUP2 373 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 RTN4IP1Q8WWV3 396 aaPredicted RBP7.59□□□□□ -1.19
MSH5-218ENST00000494646 TFAP2CQ92754 450 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 MRPS24Q96EL2 167 aaKnown RBP7.59□□□□□ -1.19
MSH5-218ENST00000494646 TMED9Q9BVK6 235 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 SPACA1Q9HBV2 294 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 NECAP2Q9NVZ3 263 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 FKBP14Q9NWM8 211 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 AURKAIP1Q9NWT8 199 aaPredicted RBP7.59□□□□□ -1.19
MSH5-218ENST00000494646 RCC2Q9P258 522 aaKnown RBP7.59□□□□□ -1.19
MSH5-218ENST00000494646 GNG12Q9UBI6 72 aa7.59□□□□□ -1.19
MSH5-218ENST00000494646 H0YHG0 523 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 FGF16O43320 207 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 MPIG6BO95866 241 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 IGHG2P01859 326 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 CD1AP06126 327 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 CDK1P06493 297 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 IL3RAP26951 378 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 EBI3Q14213 229 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 MED22Q15528 200 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 NKAPLQ5M9Q1 402 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 C6orf141Q5SZD1 244 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 C6orf183Q5T699 404 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 CEACAM19Q7Z692 300 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 SLC35E3Q7Z769 313 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 CDH26Q8IXH8 852 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 CHPT1Q8WUD6 406 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 ST6GALNAC6Q969X2 333 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms