RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 ZNF497Q6ZNH5 498 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 LINC00596Q86U02 117 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 LYPD6Q86Y78 171 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 DRAM1Q8N682 238 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 OR10X1Q8NGY0 326 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 OR56B4Q8NH76 319 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 MYDGFQ969H8 173 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 CREB3L1Q96BA8 519 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 RBMXL1Q96E39 390 aaKnown RBP8.5□□□□□ -1.05
COL6A3-214ENST00000493608 CITED2Q99967 270 aaPredicted RBP8.5□□□□□ -1.05
COL6A3-214ENST00000493608 MND1Q9BWT6 205 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 WNT10AQ9GZT5 417 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 LINC00574Q9H8X3 128 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 ETAA1Q9NY74 926 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 LSM2Q9Y333 95 aaKnown RBP8.5□□□□□ -1.05
COL6A3-214ENST00000493608 PEX16Q9Y5Y5 336 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 NOTCH3Q9UM47 2321 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 A0A1W2PRX2 142 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 G3V4G9 280 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 H0YHG0 523 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 AIPO00170 330 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 SDCBPO00560 298 aaPredicted RBP8.49□□□□□ -1.05
COL6A3-214ENST00000493608 MPIG6BO95866 241 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 AMY1AP04745 511 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 AMY2AP04746 511 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 HSMCR30P0CW71 290 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 MGMTP16455 207 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 MADCAM1Q13477 382 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 HES1Q14469 280 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 SPHARQ15513 63 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 PDLIM3Q53GG5 364 aaPredicted RBP8.49□□□□□ -1.05
COL6A3-214ENST00000493608 LIPKQ5VXJ0 399 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 CCDC144NLQ6NUI1 221 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 C10orf99Q6UWK7 81 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 C16orf82Q7Z2V1 217 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 CEACAM19Q7Z692 300 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 CENPVQ7Z7K6 275 aaPredicted RBP8.49□□□□□ -1.05
COL6A3-214ENST00000493608 MOB3BQ86TA1 216 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 LRRTM1Q86UE6 522 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 WFDC3Q8IUB2 231 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 PRR18Q8N4B5 295 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 OR5AU1Q8NGC0 362 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 OR1L1Q8NH94 360 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 WIPF2Q8TF74 440 aaPredicted RBP8.49□□□□□ -1.05
COL6A3-214ENST00000493608 TMEM203Q969S6 136 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 KCNK15Q9H427 330 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 TRAPPC2LQ9UL33 140 aa8.49□□□□□ -1.05
COL6A3-214ENST00000493608 AMMECR1Q9Y4X0 333 aaPredicted RBP8.49□□□□□ -1.05
COL6A3-214ENST00000493608 IGHV3-72A0A0B4J1Y9 119 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 A0A1W2PPI3 338 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A18PA6NE21 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A16PA6NEW6 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A20PA6NIJ5 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A12PA8MX19 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A5PA8MXJ8 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 OOSP1A8MZH6 123 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 C12orf77C9JDV5 145 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 SLC31A2O15432 143 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 GSTP1P09211 210 aaKnown RBP8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A15PP0C7V4 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A13PP0C7W8 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A14PP0C7W9 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM90A24PP0C7X0 464 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FAM106CPP0CH98 169 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 RCC1P18754 421 aaPredicted RBP8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FUT3P21217 361 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 MYF6P23409 242 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 MAPK3P27361 379 aaPredicted RBP8.48□□□□□ -1.05
COL6A3-214ENST00000493608 LOXL3P58215 753 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 SLC35A2P78381 396 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 GPR50Q13585 617 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 IRF3Q14653 427 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 RBM48Q5RL73 367 aaKnown RBP8.48□□□□□ -1.05
COL6A3-214ENST00000493608 RNLSQ5VYX0 342 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 SIGIRRQ6IA17 410 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 CDH26Q8IXH8 852 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 MS4A15Q8N5U1 240 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 OR10A7Q8NGE5 316 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 OR10V1Q8NGI7 309 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 R3HDM4Q96D70 268 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 MRPS24Q96EL2 167 aaKnown RBP8.48□□□□□ -1.05
COL6A3-214ENST00000493608 AKR1E2Q96JD6 320 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 Q96M66 194 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 FANCD2OSQ96PS1 177 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 UQCC2Q9BRT2 126 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 CCDC90BQ9GZT6 254 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 SPACA1Q9HBV2 294 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 GFOD1Q9NXC2 390 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 RCC2Q9P258 522 aaKnown RBP8.48□□□□□ -1.05
COL6A3-214ENST00000493608 TPRKBQ9Y3C4 175 aa8.48□□□□□ -1.05
COL6A3-214ENST00000493608 CCRL2O00421 344 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 HSD17B6O14756 317 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 ORC5O43913 435 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 IGKV1D-33P01593 117 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 IGKV1-33P01594 117 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 HBZP02008 142 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 PRB2P02812 416 aaPredicted RBP8.47□□□□□ -1.05
COL6A3-214ENST00000493608 OPN1MWP04001 364 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 GAPDHP04406 335 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms