RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 CCDC42Q96M95 316 aa3.05□□□□□ -1.92
VPS13A-212ENST00000493341 GPR82Q96P67 336 aa3.05□□□□□ -1.92
VPS13A-212ENST00000493341 OLFM3Q96PB7 478 aa3.05□□□□□ -1.92
VPS13A-212ENST00000493341 EBPLQ9BY08 206 aa3.05□□□□□ -1.92
VPS13A-212ENST00000493341 MAP1LC3AQ9H492 121 aa3.05□□□□□ -1.92
VPS13A-212ENST00000493341 BABAM2Q9NXR7 383 aa3.05□□□□□ -1.92
VPS13A-212ENST00000493341 EMC3Q9P0I2 261 aa3.05□□□□□ -1.92
VPS13A-212ENST00000493341 IGKV1-6A0A0C4DH72 117 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 KLLNB2CW77 178 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 M0R036 132 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 VAMP5O95183 116 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 C1GALT1C1LP0DN25 315 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 S100A2P29034 98 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 HOXA6P31267 233 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 ZNF133P52736 654 aaPredicted RBP3.04□□□□□ -1.92
VPS13A-212ENST00000493341 GTF2BQ00403 316 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 ATP5G2Q06055 141 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 PPP1R1AQ13522 171 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 TMEM241Q24JQ0 296 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 LRRN1Q6UXK5 716 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 C10orf67Q8IYJ2 551 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 ZDHHC22Q8N966 263 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 ZIC4Q8N9L1 334 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 CCDC112Q8NEF3 446 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 OR2Z1Q8NG97 314 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 OR10G2Q8NGC3 310 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 SLC37A2Q8TED4 501 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 ANKRD7Q92527 254 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 MROQ9BYG7 248 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 OR51V1Q9H2C8 321 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 ANKRD12Q6UB98 2062 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 MYOM2P54296 1465 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 TECPR2O15040 1411 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 SETD5Q9C0A6 1442 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 ABCC11Q96J66 1382 aa3.04□□□□□ -1.92
VPS13A-212ENST00000493341 IGLV4-69A0A075B6H9 119 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 WI2-2373I1.2A0A1W2PRP0 233 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 A8MWL6 223 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 CXorf1O96002 111 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 CFL1P23528 166 aaKnown RBP3.03□□□□□ -1.92
VPS13A-212ENST00000493341 HSPA13P48723 471 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 SULT1A2P50226 295 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ACTBP60709 375 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ACTG1P63261 375 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 C1DQ13901 141 aaKnown RBP3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ZNF658BQ4V348 819 aaPredicted RBP3.03□□□□□ -1.92
VPS13A-212ENST00000493341 GLYATQ6IB77 296 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 NANOGP8Q6NSW7 305 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 Q6ZR03 302 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 UBALD2Q8IYN6 164 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ZNF555Q8NEP9 628 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 OR11L1Q8NGX0 322 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ESR2Q92731 530 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 SLC25A46Q96AG3 418 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 TIPINQ9BVW5 301 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 TSGA10Q9BZW7 698 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 CDC42BPGQ6DT37 1551 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ASXL1Q8IXJ9 1541 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 FMN2Q9NZ56 1722 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 MARF1Q9Y4F3 1742 aaKnown RBP3.03□□□□□ -1.92
VPS13A-212ENST00000493341 DOCK8Q8NF50 2099 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 CNMDO75829 334 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ARL6IP5O75915 188 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 KCNK2O95069 426 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 IL1RNP18510 177 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 TGFBR1P36897 503 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 TAF6P49848 677 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 RAB2AP61019 212 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 LRRC26Q2I0M4 334 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ACSM3Q53FZ2 586 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 KLHL12Q53G59 568 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 C2orf83Q53S99 150 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 CENPWQ5EE01 88 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 TMEM31Q5JXX7 168 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ELP2Q6IA86 826 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 MTERF4Q7Z6M4 381 aaKnown RBP3.03□□□□□ -1.92
VPS13A-212ENST00000493341 LRRC34Q8IZ02 419 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 DTD1Q8TEA8 209 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ASB13Q8WXK3 278 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 PRSS27Q9BQR3 290 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 DERL2Q9GZP9 239 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 TAC3Q9UHF0 121 aa3.03□□□□□ -1.92
VPS13A-212ENST00000493341 ADGRL3Q9HAR2 1447 aa3.03□□□□□ -1.93
VPS13A-212ENST00000493341 KIF1AQ12756 1690 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 ADGRB2O60241 1585 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 ISG15P05161 165 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 MLNP12872 115 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 S100A5P33763 92 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 C1QTNF8P60827 252 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 REEP5Q00765 189 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 PAFAH1B3Q15102 231 aaKnown RBP3.02□□□□□ -1.93
VPS13A-212ENST00000493341 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 MORN3Q6PF18 240 aaPredicted RBP3.02□□□□□ -1.93
VPS13A-212ENST00000493341 CD200R1LQ6Q8B3 271 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 FAM19A3Q7Z5A8 133 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 OR8K1Q8NGG5 319 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 OR4C13Q8NGP0 309 aa3.02□□□□□ -1.93
VPS13A-212ENST00000493341 OR9A2Q8NGT5 310 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms