RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 PCDHB16Q9NRJ7 776 aa11.95□□□□□ -0.5
EPHB4-209ENST00000492878 MRPS28Q9Y2Q9 187 aaKnown RBP11.95□□□□□ -0.5
EPHB4-209ENST00000492878 MOB4Q9Y3A3 225 aa11.95□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A18PA6NE21 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A16PA6NEW6 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A20PA6NIJ5 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A9PA6NNJ1 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A12PA8MX19 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A5PA8MXJ8 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 SEC14L6B5MCN3 397 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 LY6LH3BQJ8 138 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 HSPB6O14558 160 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 SC5DO75845 299 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A15PP0C7V4 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A13PP0C7W8 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A14PP0C7W9 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 FAM90A24PP0C7X0 464 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 CPEP16870 476 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 ARHGDIBP52566 201 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 RBM11P57052 281 aaKnown RBP11.94□□□□□ -0.5
EPHB4-209ENST00000492878 RPS25P62851 125 aaKnown RBP11.94□□□□□ -0.5
EPHB4-209ENST00000492878 AESQ08117 197 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 GPR176Q14439 515 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 ATXN7L3Q14CW9 347 aaPredicted RBP11.94□□□□□ -0.5
EPHB4-209ENST00000492878 TRAM1Q15629 374 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 SLC22A6Q4U2R8 563 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 HSD17B12Q53GQ0 312 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 PAN3Q58A45 887 aaKnown RBP11.94□□□□□ -0.5
EPHB4-209ENST00000492878 NHLRC3Q5JS37 347 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 AWAT2Q6E213 333 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 GLIPR1L1Q6UWM5 242 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 TRAPPC6BQ86SZ2 158 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 OR8U1Q8NH10 309 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 ACOT13Q9NPJ3 140 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 ING3Q9NXR8 418 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 ST3GAL6Q9Y274 331 aa11.94□□□□□ -0.5
EPHB4-209ENST00000492878 UBE2J1Q9Y385 318 aaPredicted RBP11.94□□□□□ -0.5
EPHB4-209ENST00000492878 TRGV10A0A0A0MS01 117 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 TRAV24A0A0B4J272 114 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 A0A1W2PP11 408 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 LEUTXA8MZ59 168 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 MRPS14O60783 128 aaKnown RBP11.93□□□□□ -0.5
EPHB4-209ENST00000492878 UCHL1P09936 223 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 GTF2F2P13984 249 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 PSMA1P25786 263 aaKnown RBP11.93□□□□□ -0.5
EPHB4-209ENST00000492878 GLIPR1P48060 266 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 RAB25P57735 213 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 FHL3Q13643 280 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 KIR2DS1Q14954 304 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 KRBOX4Q5JUW0 171 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 LINC00596Q86U02 117 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 RTN4RL2Q86UN3 420 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 ABHD12Q8N2K0 398 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 OR4D6Q8NGJ1 314 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 PHYHIPQ92561 330 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 COQ2Q96H96 371 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 UQCC2Q9BRT2 126 aa11.93□□□□□ -0.5
EPHB4-209ENST00000492878 YTHDF1Q9BYJ9 559 aaKnown RBP11.93□□□□□ -0.5
EPHB4-209ENST00000492878 ODAMA1E959 279 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 GEMIN2O14893 280 aaKnown RBP11.92□□□□□ -0.5
EPHB4-209ENST00000492878 OR7C1O76099 320 aaPredicted RBP11.92□□□□□ -0.5
EPHB4-209ENST00000492878 FRMD6-AS1P0C7T7 363 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 SRMP19623 302 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 CD34P28906 385 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 MPV17LQ2QL34 196 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 DEFB136Q30KP8 78 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 GLT8D1Q68CQ7 371 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 BAIAP2L2Q6UXY1 529 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 TMEM91Q6ZNR0 172 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 LRRTM1Q86UE6 522 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 THNSL2Q86YJ6 484 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 SVOPQ8N4V2 548 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 C5orf56Q8N8D9 126 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 ZNF596Q8TC21 504 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 CORO2AQ92828 525 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 PPIL3Q9H2H8 161 aaKnown RBP11.92□□□□□ -0.5
EPHB4-209ENST00000492878 GAL3ST2Q9H3Q3 398 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 IFT22Q9H7X7 185 aa11.92□□□□□ -0.5
EPHB4-209ENST00000492878 OOSP1A8MZH6 123 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 IGHG2P01859 326 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 KCNJ3P48549 501 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 SLC35B1P78383 322 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 SUMF2Q8NBJ7 301 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 MRPS24Q96EL2 167 aaKnown RBP11.91□□□□□ -0.5
EPHB4-209ENST00000492878 TM2D3Q9BRN9 247 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 DPCDQ9BVM2 203 aaPredicted RBP11.91□□□□□ -0.5
EPHB4-209ENST00000492878 BARHL1Q9BZE3 327 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 ZMAT4Q9H898 229 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 TAS2R3Q9NYW6 316 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 OR6C3Q9NZP0 311 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 ZNF581Q9P0T4 197 aa11.91□□□□□ -0.5
EPHB4-209ENST00000492878 SERPINE3A8MV23 424 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 BUB1B-PAK6H3BSN5 160 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 CCRL2O00421 344 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 FGF16O43320 207 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 ARL6IP5O75915 188 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 RPLP1P05386 114 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms