RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZDHHC16Q969W1 377 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 PRSS27Q9BQR3 290 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 NDUFAF3Q9BU61 184 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 ATG5Q9H1Y0 275 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 RGCCQ9H4X1 137 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 EGLN3Q9H6Z9 239 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 GCM1Q9NP62 436 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 NOX4Q9NPH5 578 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 RPS10P5Q9NQ39 176 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 CACFD1Q9UGQ2 172 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 IL19Q9UHD0 177 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 SLC7A7Q9UM01 511 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 V9GY05 133 aa10.9□□□□□ -0.66
HDAC3-213ENST00000492506 A6NIN4 97 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 ZNF705EA8MWA4 302 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-213ENST00000492506 SIGLEC5O15389 551 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 OR4E1P0C645 316 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 METTL15P1P0C7V9 234 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 PET100P0DJ07 73 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 KITLGP21583 273 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 TNFSF4P23510 183 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 ACKR3P25106 362 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 MPZP25189 248 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 OMPP47874 163 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 CX3CR1P49238 355 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 PROK1P58294 105 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 DLK1P80370 383 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 KIAA0141Q14154 515 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-213ENST00000492506 INSL4Q14641 139 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 TAF9Q16594 264 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 LY6G6FQ5SQ64 297 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 TMEM86BQ8N661 226 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 TMEM229BQ8NBD8 167 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 OR10H4Q8NGA5 316 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 LINC01006Q8NI28 216 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 SLC25A38Q96DW6 304 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 OR2V2Q96R30 315 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 CLCC1Q96S66 551 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 MICU1Q9BPX6 476 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 SULT4A1Q9BR01 284 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 ISG20L2Q9H9L3 353 aaKnown RBP10.89□□□□□ -0.67
HDAC3-213ENST00000492506 ELOVL3Q9HB03 270 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 VSX1Q9NZR4 365 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-213ENST00000492506 DNAJB11Q9UBS4 358 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 RNF114Q9Y508 228 aa10.89□□□□□ -0.67
HDAC3-213ENST00000492506 A0A087WUU8 490 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 TMEM272A0A1B0GTI8 110 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 SYT7O43581 403 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 ZNF205O95201 554 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 CST2P09228 141 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 DCTDP32321 178 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 AQP2P41181 271 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 DAP3P51398 398 aaKnown RBP10.88□□□□□ -0.67
HDAC3-213ENST00000492506 UBE2MP61081 183 aaKnown RBP10.88□□□□□ -0.67
HDAC3-213ENST00000492506 GNB2P62879 340 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 PIN1Q13526 163 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-213ENST00000492506 MEF2DQ14814 521 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 RSU1Q15404 277 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 HAGHQ16775 308 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 SAPCD1Q5SSQ6 148 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 RUSC1-AS1Q66K80 236 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 TET2Q6N021 2002 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-213ENST00000492506 FOXL2NBQ6ZUU3 175 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 MBOAT2Q6ZWT7 520 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 CPOQ8IVL8 374 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 OR52B4Q8NGK2 314 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 MAFIPQ8WZ33 124 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 GHSRQ92847 366 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 FOXRED1Q96CU9 486 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-213ENST00000492506 KIRREL1Q96J84 757 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 ADAT1Q9BUB4 502 aaKnown RBP10.88□□□□□ -0.67
HDAC3-213ENST00000492506 MRPL15Q9P015 296 aaKnown RBP10.88□□□□□ -0.67
HDAC3-213ENST00000492506 FAM96BQ9Y3D0 163 aa10.88□□□□□ -0.67
HDAC3-213ENST00000492506 SIRT4Q9Y6E7 314 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-213ENST00000492506 COL7A1Q02388 2944 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 A0A0A6YYH2 397 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 CXorf65A6NEN9 183 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 A6NJ64 397 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 NPIPB13A6NJU9 1138 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 NPIPB4C9JG80 1138 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 TNFRSF13BO14836 293 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-213ENST00000492506 PPP1R2P9O14990 202 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 FSTL3O95633 263 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 OR2T7P0C7T2 308 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 FUT1P19526 365 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 NFYBP25208 207 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 GSK3AP49840 483 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 TAS2R31P59538 309 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 BPIFB3P59826 476 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 RPL15P61313 204 aaKnown RBP10.87□□□□□ -0.67
HDAC3-213ENST00000492506 FGF12P61328 243 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 ENDOGQ14249 297 aaKnown RBP10.87□□□□□ -0.67
HDAC3-213ENST00000492506 PDCD1Q15116 288 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 KRBOX4Q5JUW0 171 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 IZUMO1Q8IYV9 350 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 ZNF511Q8NB15 262 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 UBAC2Q8NBM4 344 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 HSD17B11Q8NBQ5 300 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 OR2T27Q8NH04 317 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms