RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 OBP2BQ9NPH6 170 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 TAAR3PQ9P1P4 343 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 TRAPPC2LQ9UL33 140 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 TLN1Q9Y490 2541 aaKnown RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 KIR2DS1A0A191URI9 304 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 WRBO00258 174 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 CHST1O43916 411 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 PVALBP20472 110 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 KIR2DS4P43632 304 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 FABP6P51161 128 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 EIF5AP63241 154 aaKnown RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 CCL20P78556 96 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 KIR2DS1Q14954 304 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 DEFB109BQ30KR1 87 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 NMSQ5H8A3 153 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 ZNF324BQ6AW86 544 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 FAM180AQ6UWF9 173 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 SAT2Q96F10 170 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 MPC1Q9Y5U8 109 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 OR5B21A6NL26 309 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 A6NLC8 198 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 FAM157AC9JC47 383 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 J3QT63 122 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 PSPNO60542 156 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 CDS2O95674 445 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 ATP6V0CP27449 155 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 RPS16P62249 146 aaKnown RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 HFEQ30201 348 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 SAXO1Q8IYX7 474 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 NANOS1Q8WY41 292 aaKnown RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 ISOC2Q96AB3 205 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 RARRES2Q99969 163 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 PARP11Q9NR21 331 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 FAM212BQ9NTI7 297 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 PRELID1Q9Y255 219 aa10.54□□□□□ -0.72
HMGN1-220ENST00000492280 CARHSP1Q9Y2V2 147 aaKnown RBP10.54□□□□□ -0.72
HMGN1-220ENST00000492280 BORCS7-ASMTA0A0B4J1R7 106 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 MLNRO43193 412 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 OR13C7P0DN81 318 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 SPP1P10451 314 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 IL24Q13007 206 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 IL13RA2Q14627 380 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM76BQ5HYJ3 339 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 CMTM1Q8IZ96 169 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 TMEM252Q8N6L7 170 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
HMGN1-220ENST00000492280 TMEM56Q96MV1 263 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 SEC11CQ9BY50 192 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 C19orf12Q9NSK7 152 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 METRNQ9UJH8 293 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 OR2W1Q9Y3N9 320 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 TMEM56-RWDD3S4R434 201 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A10PA6NDY2 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A18PA6NE21 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A16PA6NEW6 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A20PA6NIJ5 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A8PA6NJQ4 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A7PA6NKC0 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A22PA8MWA6 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A12PA8MX19 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A5PA8MXJ8 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A23PA8MXZ1 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 IGLV2-14P01704 120 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 CD5P06127 495 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A15PP0C7V4 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A13PP0C7W8 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A14PP0C7W9 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 FAM90A24PP0C7X0 464 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 DANCRP0C864 163 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 F2RP25116 425 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 PMELP40967 661 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 VAMP2P63027 116 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 TLE1Q04724 770 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 TESK1Q15569 626 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 LTC4SQ16873 150 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 RPRMLQ8N4K4 120 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 ZNF808Q8N4W9 903 aaPredicted RBP10.53□□□□□ -0.72
HMGN1-220ENST00000492280 OR2G3Q8NGZ4 309 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 IP6K3Q96PC2 410 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 RTL8AQ9BWD3 113 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 OPN3Q9H1Y3 402 aaPredicted RBP10.53□□□□□ -0.72
HMGN1-220ENST00000492280 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 CACFD1Q9UGQ2 172 aa10.53□□□□□ -0.72
HMGN1-220ENST00000492280 IGHV3-43A0A0B4J1X8 118 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 IGHV3-13P01766 116 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 IGHV3-7P01780 117 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 SNRNP70P08621 437 aaKnown RBP10.52□□□□□ -0.72
HMGN1-220ENST00000492280 IGHV3-43DP0DP04 118 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 UCP1P25874 307 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 GUK1Q16774 197 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 C10orf91Q5T1B1 145 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 Q6ZR03 302 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 OR1L1Q8NH94 360 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 KLF14Q8TD94 323 aaPredicted RBP10.52□□□□□ -0.72
HMGN1-220ENST00000492280 GPR146Q96CH1 333 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 GMPPAQ96IJ6 420 aaPredicted RBP10.52□□□□□ -0.72
HMGN1-220ENST00000492280 C11orf1Q9H5F2 150 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms