RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 SESN1Q9Y6P5 492 aa9.08□□□□□ -0.96
USP4-214ENST00000491791 USP9XQ93008 2570 aaPredicted RBP9.07□□□□□ -0.96
USP4-214ENST00000491791 IGKV1D-13A0A0B4J2D9 117 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 K7EPK0 472 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 JTBO76095 146 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 OR2H2O95918 312 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 HEXAP06865 529 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 IGKV1-13P0DP09 117 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 RPL12P30050 165 aaKnown RBP9.07□□□□□ -0.96
USP4-214ENST00000491791 ERVS71-1P61550 626 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 PHLDA2Q53GA4 152 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 TMEM268Q5VZI3 342 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 ZNF585AQ6P3V2 769 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 ZNF818PQ6ZRF7 136 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 UBAC2Q8NBM4 344 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 OR11L1Q8NGX0 322 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 FAM57AQ8TBR7 257 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 NEK7Q8TDX7 302 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 TP53RKQ96S44 253 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 NCOR1P1Q9H4R4 102 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 GSKIPQ9P0R6 139 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 GLS2Q9UI32 602 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 POMT1Q9Y6A1 747 aa9.07□□□□□ -0.96
USP4-214ENST00000491791 SHANK1Q9Y566 2161 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 A0A1W2PR80 420 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 CDIPTO14735 213 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 ST8SIA3O43173 380 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 PHF1O43189 567 aaPredicted RBP9.06□□□□□ -0.96
USP4-214ENST00000491791 GPR137BO60478 399 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 PGLYRP1O75594 196 aaPredicted RBP9.06□□□□□ -0.96
USP4-214ENST00000491791 AGFG2O95081 481 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 NXPH2O95156 264 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 IGHV3-13P01766 116 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 VDAC1P21796 283 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 F2RP25116 425 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 S100GP29377 79 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 NKX6-1P78426 367 aaPredicted RBP9.06□□□□□ -0.96
USP4-214ENST00000491791 SP6Q3SY56 376 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 NMSQ5H8A3 153 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 BEX5Q5H9J7 111 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 ZNF474Q6S9Z5 364 aaPredicted RBP9.06□□□□□ -0.96
USP4-214ENST00000491791 WDR82Q6UXN9 313 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 Q6ZR03 302 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 TBC1D26Q86UD7 250 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 RELL2Q8NC24 303 aaPredicted RBP9.06□□□□□ -0.96
USP4-214ENST00000491791 ZBTB34Q8NCN2 500 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 OR5T2Q8NGG2 359 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 OR10J5Q8NHC4 309 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 PLPPR1Q8TBJ4 325 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 PCNPQ8WW12 178 aaKnown RBP9.06□□□□□ -0.96
USP4-214ENST00000491791 RDH5Q92781 318 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 CCDC120Q96HB5 630 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 SMIM8Q96KF7 97 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 PSMG3-AS1Q96PY0 264 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 OPN3Q9H1Y3 402 aaPredicted RBP9.06□□□□□ -0.96
USP4-214ENST00000491791 FAM212BQ9NTI7 297 aaPredicted RBP9.06□□□□□ -0.96
USP4-214ENST00000491791 TAAR3PQ9P1P4 343 aa9.06□□□□□ -0.96
USP4-214ENST00000491791 MYO9AB2RTY4 2548 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 IGLV3-9A0A075B6K5 115 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 TMEM30CPA0ZSE6 113 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 TEX46H3BTG2 121 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 HS3ST1O14792 307 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 BET1O15155 118 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 PITX3O75364 302 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 ZNF205O95201 554 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 HAND1O96004 215 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 IGLV2-14P01704 120 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 ZNF44P15621 663 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 RCC1P18754 421 aaPredicted RBP9.05□□□□□ -0.96
USP4-214ENST00000491791 GCH1P30793 250 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 GLRXP35754 106 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 TMEM33P57088 247 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 ID3Q02535 119 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 ACP7Q6ZNF0 438 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 SLC35G3Q8N808 338 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 DMBX1Q8NFW5 382 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 OR10V1Q8NGI7 309 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 LYPD6BQ8NI32 183 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 LSM10Q969L4 123 aaKnown RBP9.05□□□□□ -0.96
USP4-214ENST00000491791 MARC2Q969Z3 335 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 OR51B6Q9H340 312 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 CCL28Q9NRJ3 127 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 TINAGQ9UJW2 476 aa9.05□□□□□ -0.96
USP4-214ENST00000491791 UBE2J1Q9Y385 318 aaPredicted RBP9.05□□□□□ -0.96
USP4-214ENST00000491791 A8MXE2 369 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 H0YL77 283 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 CRYZL1O95825 349 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 TDGF1P3P51864 188 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 S100A10P60903 97 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 TESK1Q15569 626 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 CR1LQ2VPA4 569 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 IL34Q6ZMJ4 242 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 ZNF695Q8IW36 515 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 BATF2Q8N1L9 274 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 GALNT11Q8NCW6 608 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 SECTM1Q8WVN6 248 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 LURAP1Q96LR2 239 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 LPAR3Q9UBY5 353 aa9.04□□□□□ -0.96
USP4-214ENST00000491791 ZNF835Q9Y2P0 537 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms