RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 COL7A1Q02388 2944 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 NUDT19A8MXV4 375 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 HBZP02008 142 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 ALDOBP05062 364 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 VSIG8P0DPA2 414 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 MYF6P23409 242 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 PPP3R1P63098 170 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 RAB12Q6IQ22 244 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 ODF3L1Q8IXM7 274 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 STPG2Q8N412 459 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 TFAP2CQ92754 450 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 MRPL48Q96GC5 212 aaKnown RBP6.99□□□□□ -1.29
HDAC3-211ENST00000491581 TMEM80Q96HE8 168 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 AKR1E2Q96JD6 320 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 DERL3Q96Q80 235 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 OR5B12Q96R08 314 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 NICN1Q9BSH3 213 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 SELENOIQ9C0D9 397 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 RHOFQ9HBH0 211 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 PAK1IP1Q9NWT1 392 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-211ENST00000491581 ETAA1Q9NY74 926 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 IL36GQ9NZH8 169 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 AMMECR1Q9Y4X0 333 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-211ENST00000491581 PEX16Q9Y5Y5 336 aa6.99□□□□□ -1.29
HDAC3-211ENST00000491581 OOSP1A8MZH6 123 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 G3V318 75 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 CRTAPO75718 401 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-211ENST00000491581 IGHG2P01859 326 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 CD2P06729 351 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 MGMTP16455 207 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 MYL12AP19105 171 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 CELP19835 753 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 DCKP27707 260 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 PPP1CCP36873 323 aaKnown RBP6.98□□□□□ -1.29
HDAC3-211ENST00000491581 GPR12P47775 334 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 OR3A3P47888 321 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 RAB7AP51149 207 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 LINC00205P59089 165 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 SLC35A2P78381 396 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 ZNF816Q0VGE8 651 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-211ENST00000491581 Q499Y3 187 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 CCDC58Q4VC31 144 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 NKAPLQ5M9Q1 402 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 AWAT2Q6E213 333 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 CCDC144NLQ6NUI1 221 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 TMPRSS11AQ6ZMR5 421 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 THNSL2Q86YJ6 484 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 BPIFB6Q8NFQ5 453 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 HAVCR2Q8TDQ0 301 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 PRR25Q96S07 402 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 P2RX4Q99571 388 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 SULT4A1Q9BR01 284 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 HDHD3Q9BSH5 251 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-211ENST00000491581 KLK15Q9H2R5 256 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 IFT22Q9H7X7 185 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 RCC2Q9P258 522 aaKnown RBP6.98□□□□□ -1.29
HDAC3-211ENST00000491581 NKX1-2Q9UD57 310 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-211ENST00000491581 TRAPPC2LQ9UL33 140 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 EXOSC1Q9Y3B2 195 aaKnown RBP6.98□□□□□ -1.29
HDAC3-211ENST00000491581 FBXO7Q9Y3I1 522 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 WSB1Q9Y6I7 421 aa6.98□□□□□ -1.29
HDAC3-211ENST00000491581 A0A0A6YYD4 124 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 EBAG9O00559 213 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 GAPDHP04406 335 aaKnown RBP6.97□□□□□ -1.29
HDAC3-211ENST00000491581 GTF2F2P13984 249 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 PAX5Q02548 391 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 MRPL28Q13084 256 aaKnown RBP6.97□□□□□ -1.29
HDAC3-211ENST00000491581 PLA2G7Q13093 441 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 EBI3Q14213 229 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 MPV17LQ2QL34 196 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 NHLRC3Q5JS37 347 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 ASPHD1Q5U4P2 390 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 GLDNQ6ZMI3 551 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-211ENST00000491581 REC114Q7Z4M0 266 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 C6orf201Q7Z4U5 140 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 OR8H3Q8N146 312 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 DHRSXQ8N5I4 330 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 MRPL30Q8TCC3 161 aaKnown RBP6.97□□□□□ -1.29
HDAC3-211ENST00000491581 CREB3L1Q96BA8 519 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 Q96M66 194 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 RDH12Q96NR8 316 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 S1PR3Q99500 378 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 S100A13Q99584 98 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 GFI1Q99684 422 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 FAAP24Q9BTP7 215 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 TMED9Q9BVK6 235 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 MRPL20Q9BYC9 149 aaKnown RBP6.97□□□□□ -1.29
HDAC3-211ENST00000491581 ALX4Q9H161 411 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-211ENST00000491581 ABCG5Q9H222 651 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 NCOR1P1Q9H4R4 102 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 DCLRE1BQ9H816 532 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 GNB4Q9HAV0 340 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 TAF9BQ9HBM6 251 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 GNG12Q9UBI6 72 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 PSORS1C1Q9UIG5 152 aa6.97□□□□□ -1.29
HDAC3-211ENST00000491581 MCRIP1C9JLW8 97 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 CCL24O00175 119 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 GPX5O75715 221 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 FSTP19883 344 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 HTR2CP28335 458 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms