RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 C6orf141Q5SZD1 244 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 FAM27D1Q5T7N8 215 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 SYT6Q5T7P8 510 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-219ENST00000491183 RNLSQ5VYX0 342 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 C8orf31Q8N9H6 132 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 WFDC9Q8NEX5 89 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 SGCDQ92629 289 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 ST6GALNAC6Q969X2 333 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 SELENOIQ9C0D9 397 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 DCLRE1BQ9H816 532 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 ETAA1Q9NY74 926 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 TSSC4Q9Y5U2 329 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-219ENST00000491183 IGHV3-72A0A0B4J1Y9 119 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 PTGES3LE9PB15 166 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 CCRL2O00421 344 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 SLC31A2O15432 143 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 RCC1P18754 421 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-219ENST00000491183 MOB3BQ86TA1 216 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 NKAIN3Q8N8D7 197 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 Q96M66 194 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 UQCC2Q9BRT2 126 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 TRAPPC2LQ9UL33 140 aa14.26□□□□□ -0.13
HMGN1-219ENST00000491183 LSM2Q9Y333 95 aaKnown RBP14.26□□□□□ -0.13
HMGN1-219ENST00000491183 FAM90A10PA6NDY2 464 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 FAM90A7PA6NKC0 464 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 FAM90A23PA8MXZ1 464 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 FGF16O43320 207 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 CRTAPO75718 401 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-219ENST00000491183 SC5DO75845 299 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 FUT3P21217 361 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 MAPK3P27361 379 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-219ENST00000491183 ZNF134P52741 427 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 C5orf24Q7Z6I8 188 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 LRRTM1Q86UE6 522 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 ZNF439Q8NDP4 499 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 OR4X2Q8NGF9 303 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 OR1L1Q8NH94 360 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 NRG4Q8WWG1 115 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 THRSPQ92748 146 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 EAF1Q96JC9 268 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-219ENST00000491183 VCXQ9H320 206 aa14.25□□□□□ -0.13
HMGN1-219ENST00000491183 UBE2QL1A1L167 161 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 HBZP02008 142 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 GLAP06280 429 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 GABPB1Q06547 395 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-219ENST00000491183 SPHARQ15513 63 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 Q3ZCU0 254 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 CT45A1Q5HYN5 189 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 SLC25A48Q6ZT89 311 aaKnown RBP14.24□□□□□ -0.13
HMGN1-219ENST00000491183 ZNF329Q86UD4 541 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 MS4A15Q8N5U1 240 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 Q8N6K4 173 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 CT45A3Q8NHU0 189 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 RTN4IP1Q8WWV3 396 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-219ENST00000491183 FAM46BQ96A09 425 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 RBMXL1Q96E39 390 aaKnown RBP14.24□□□□□ -0.13
HMGN1-219ENST00000491183 NOL4LQ96MY1 436 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-219ENST00000491183 MND1Q9BWT6 205 aa14.24□□□□□ -0.13
HMGN1-219ENST00000491183 PSMB11A5LHX3 300 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 LINC01548A6NM66 108 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 ZNF736B4DX44 427 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-219ENST00000491183 H0YHG0 523 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 SPINT2O43291 252 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 CA11O75493 328 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 PF4V1P10720 104 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 IGLL1P15814 213 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 AQP4P55087 323 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 GPR50Q13585 617 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 IRF3Q14653 427 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 C1orf100Q5SVJ3 147 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 C6orf183Q5T699 404 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 OR10K2Q6IF99 312 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 IZUMO1Q8IYV9 350 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 PRR18Q8N4B5 295 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 OR10V1Q8NGI7 309 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 PHF21AQ96BD5 680 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 TMED9Q9BVK6 235 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 TAF9BQ9HBM6 251 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 MBNL3Q9NUK0 354 aaKnown RBP14.23□□□□□ -0.13
HMGN1-219ENST00000491183 GHRLQ9UBU3 117 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 LINC00527Q9UJ94 153 aa14.23□□□□□ -0.13
HMGN1-219ENST00000491183 PDCD6O75340 191 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 IGHG2P01859 326 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 VSIG8P0DPA2 414 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 CD37P11049 281 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 CD33P20138 364 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 ZNF137PP52743 207 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 SLC35A2P78381 396 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 Q6ZPA2 131 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 Q8N9W7 124 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 OR2T10Q8NGZ9 312 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 MRPL30Q8TCC3 161 aaKnown RBP14.22□□□□□ -0.13
HMGN1-219ENST00000491183 PLSCR3Q9NRY6 295 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 SCN3BQ9NY72 215 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 GNG12Q9UBI6 72 aa14.22□□□□□ -0.13
HMGN1-219ENST00000491183 MPIG6BO95866 241 aa14.21□□□□□ -0.13
HMGN1-219ENST00000491183 IL3RAP26951 378 aa14.21□□□□□ -0.13
HMGN1-219ENST00000491183 CD1BP29016 333 aa14.21□□□□□ -0.13
HMGN1-219ENST00000491183 MED22Q15528 200 aa14.21□□□□□ -0.13
HMGN1-219ENST00000491183 TMEM30BQ3MIR4 351 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms