RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 OR51G1Q8NGK1 321 aa16.59■□□□□ 0.25
SNAPC3-206ENST00000490969 SCGB1C1Q8TD33 95 aa16.59■□□□□ 0.25
SNAPC3-206ENST00000490969 TMEM54Q969K7 222 aa16.59■□□□□ 0.25
SNAPC3-206ENST00000490969 SMIM7Q9BQ49 75 aa16.59■□□□□ 0.25
SNAPC3-206ENST00000490969 IL36GQ9NZH8 169 aa16.59■□□□□ 0.25
SNAPC3-206ENST00000490969 NUBP1P53384 320 aa16.58■□□□□ 0.25
SNAPC3-206ENST00000490969 PMS2P11Q13670 270 aa16.58■□□□□ 0.25
SNAPC3-206ENST00000490969 PEAR1Q5VY43 1037 aaPredicted RBP16.58■□□□□ 0.25
SNAPC3-206ENST00000490969 OR2M3Q8NG83 312 aa16.58■□□□□ 0.25
SNAPC3-206ENST00000490969 TMEM170AQ8WVE7 144 aa16.58■□□□□ 0.25
SNAPC3-206ENST00000490969 TMEM18Q96B42 140 aa16.58■□□□□ 0.25
SNAPC3-206ENST00000490969 RBKSQ9H477 322 aa16.58■□□□□ 0.25
SNAPC3-206ENST00000490969 PRSS50Q9UI38 385 aa16.58■□□□□ 0.25
SNAPC3-206ENST00000490969 DHHO43323 396 aa16.58■□□□□ 0.24
SNAPC3-206ENST00000490969 NRASP01111 189 aa16.58■□□□□ 0.24
SNAPC3-206ENST00000490969 RBM11P57052 281 aaKnown RBP16.58■□□□□ 0.24
SNAPC3-206ENST00000490969 CYP2G1PQ6ZSU1 146 aa16.58■□□□□ 0.24
SNAPC3-206ENST00000490969 ANKRD37Q7Z713 158 aa16.58■□□□□ 0.24
SNAPC3-206ENST00000490969 ZNF295-AS1Q8N0V1 137 aa16.58■□□□□ 0.24
SNAPC3-206ENST00000490969 DUSP23Q9BVJ7 150 aa16.58■□□□□ 0.24
SNAPC3-206ENST00000490969 IGHV5-10-1A0A0J9YXX1 117 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 OR7C1O76099 320 aaPredicted RBP16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 GALR1P47211 349 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 RPS18P62269 152 aaKnown RBP16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 HNF4GQ14541 408 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 IQCJQ1A5X6 159 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 FAM69BQ5VUD6 431 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 ZNF385AQ96PM9 386 aaKnown RBP16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 AGMATQ9BSE5 352 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 RNF150Q9ULK6 438 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 CELSR3Q9NYQ7 3312 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 IGKV1D-13A0A0B4J2D9 117 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 M0R143 59 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 IFNA1P01562 189 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 IGKV1-13P0DP09 117 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 CRYGSP22914 178 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 IDH3GP51553 393 aaPredicted RBP16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 FAM3BP58499 235 aaPredicted RBP16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 TMEM241Q24JQ0 296 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 MRPL41Q8IXM3 137 aaKnown RBP16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 ZNF845Q96IR2 970 aaPredicted RBP16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 OR5B12Q96R08 314 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 CBLN4Q9NTU7 201 aa16.57■□□□□ 0.24
SNAPC3-206ENST00000490969 KIAA2026Q5HYC2 2103 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 H7BYZ3 331 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 SFTPCP11686 197 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 FGF5P12034 268 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 BSXQ3C1V8 233 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 TEX38Q6PEX7 206 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 OR5D13Q8NGL4 314 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 TMEM37Q8WXS4 190 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 PCGF1Q9BSM1 259 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 PSMG3Q9BT73 122 aaPredicted RBP16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 CHD3Q12873 2000 aaKnown RBP16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 SLC22A20A6NK97 555 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 MMP7P09237 267 aaPredicted RBP16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 MDH2P40926 338 aaKnown RBP16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 DAZAP2Q15038 168 aaPredicted RBP16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 ACSF3Q4G176 576 aaPredicted RBP16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 TMEM42Q69YG0 159 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 GPR137CQ8N3F9 429 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 OR6C1Q96RD1 312 aa16.56■□□□□ 0.24
SNAPC3-206ENST00000490969 A0A0G2JRQ6 117 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 MAP1LC3B2A6NCE7 125 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 CCKARP32238 428 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 ERVFC1-1P60608 527 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 BATF2Q8N1L9 274 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 IL22RA2Q969J5 263 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 ELOVL1Q9BW60 279 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 MAP1LC3BQ9GZQ8 125 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 CCL28Q9NRJ3 127 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 FUT9Q9Y231 359 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 CNTRLQ7Z7A1 2325 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 B4E171 279 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 LCATP04180 440 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 SP9P0CG40 484 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 TSPAN7P41732 249 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 RPL23P62829 140 aaKnown RBP16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 CLEC12BQ2HXU8 276 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 ACTL10Q5JWF8 245 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 FAM180AQ6UWF9 173 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 CENPVQ7Z7K6 275 aaPredicted RBP16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 CCDC74BQ96LY2 380 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 RAB40CQ96S21 281 aa16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 AKIRIN1Q9H9L7 192 aaPredicted RBP16.55■□□□□ 0.24
SNAPC3-206ENST00000490969 A0A1W2PPQ1 181 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 H0Y980 276 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 ZNF737O75373 536 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 KBTBD11O94819 623 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 SCTP09683 121 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 TDGF1P3P51864 188 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 Q6ZS49 121 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 IFI44Q8TCB0 444 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 EXTL1Q92935 676 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 ZNF837Q96EG3 531 aaPredicted RBP16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 IGHV3-15A0A0B4J1V0 119 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 HRASP01112 189 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 METTL15P1P0C7V9 234 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 ZNF25P17030 456 aaPredicted RBP16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 FUT6P51993 359 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms