RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 EAF1Q96JC9 268 aaPredicted RBP21.98■■□□□ 1.11
HOXB3-211ENST00000490677 Q96M66 194 aa21.98■■□□□ 1.11
HOXB3-211ENST00000490677 BANF2Q9H503 90 aa21.98■■□□□ 1.11
HOXB3-211ENST00000490677 SPACA1Q9HBV2 294 aa21.98■■□□□ 1.11
HOXB3-211ENST00000490677 PSMB11A5LHX3 300 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 CCRL2O00421 344 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 IGHG2P01859 326 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 GAPDHP04406 335 aaKnown RBP21.97■■□□□ 1.11
HOXB3-211ENST00000490677 MGMTP16455 207 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 CD33P20138 364 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 VHLP40337 213 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 ZNF134P52741 427 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 INSL4Q14641 139 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 Q3ZCU0 254 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 SYT6Q5T7P8 510 aaPredicted RBP21.97■■□□□ 1.11
HOXB3-211ENST00000490677 AWAT2Q6E213 333 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 RAB12Q6IQ22 244 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 ETV3LQ6ZN32 361 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 BPIFB6Q8NFQ5 453 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 RTN4IP1Q8WWV3 396 aaPredicted RBP21.97■■□□□ 1.11
HOXB3-211ENST00000490677 TFAP2CQ92754 450 aa21.97■■□□□ 1.11
HOXB3-211ENST00000490677 IGHV3-72A0A0B4J1Y9 119 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 FAM90A10PA6NDY2 464 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 FAM90A7PA6NKC0 464 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 LINC01548A6NM66 108 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 FAM90A23PA8MXZ1 464 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 ZNF137PP52743 207 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 UNQ9370/PRO34162Q6UXP9 181 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 SLC25A48Q6ZT89 311 aaKnown RBP21.96■■□□□ 1.11
HOXB3-211ENST00000490677 STX19Q8N4C7 294 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 OR4K15Q8NH41 348 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 RBMXL1Q96E39 390 aaKnown RBP21.96■■□□□ 1.11
HOXB3-211ENST00000490677 ETAA1Q9NY74 926 aa21.96■■□□□ 1.11
HOXB3-211ENST00000490677 COL7A1Q02388 2944 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 MCRIP1C9JLW8 97 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 MYL12BO14950 172 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 RCC1P18754 421 aaPredicted RBP21.95■■□□□ 1.1
HOXB3-211ENST00000490677 RNLSQ5VYX0 342 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 MOB3BQ86TA1 216 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 SGCDQ92629 289 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 SELENOIQ9C0D9 397 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 PLSCR3Q9NRY6 295 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 LINC00527Q9UJ94 153 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 PEX16Q9Y5Y5 336 aa21.95■■□□□ 1.1
HOXB3-211ENST00000490677 ZNF736B4DX44 427 aaPredicted RBP21.94■■□□□ 1.1
HOXB3-211ENST00000490677 CT45A1Q5HYN5 189 aa21.94■■□□□ 1.1
HOXB3-211ENST00000490677 NKAIN3Q8N8D7 197 aa21.94■■□□□ 1.1
HOXB3-211ENST00000490677 Q8N9W7 124 aa21.94■■□□□ 1.1
HOXB3-211ENST00000490677 OR1L1Q8NH94 360 aa21.94■■□□□ 1.1
HOXB3-211ENST00000490677 CT45A3Q8NHU0 189 aa21.94■■□□□ 1.1
HOXB3-211ENST00000490677 UQCC2Q9BRT2 126 aa21.94■■□□□ 1.1
HOXB3-211ENST00000490677 MBNL3Q9NUK0 354 aaKnown RBP21.94■■□□□ 1.1
HOXB3-211ENST00000490677 LSM2Q9Y333 95 aaKnown RBP21.94■■□□□ 1.1
HOXB3-211ENST00000490677 DNAH9Q9NYC9 4486 aa21.94■■□□□ 1.1
HOXB3-211ENST00000490677 HBZP02008 142 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 CDK1P06493 297 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 FAM27D1Q5T7N8 215 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 C18orf65Q6ZTR6 163 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 C5orf24Q7Z6I8 188 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 TGIF2LXQ8IUE1 241 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 LINC00482Q8N8I6 264 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 CHPT1Q8WUD6 406 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 TRAPPC2LQ9UL33 140 aa21.93■■□□□ 1.1
HOXB3-211ENST00000490677 ANKRD65E5RJM6 399 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 CA11O75493 328 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 CRTAPO75718 401 aaPredicted RBP21.92■■□□□ 1.1
HOXB3-211ENST00000490677 PF4P02776 101 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 GLAP06280 429 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 FUT3P21217 361 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 RPL23AP62750 156 aaKnown RBP21.92■■□□□ 1.1
HOXB3-211ENST00000490677 KHDC1LQ5JSQ8 128 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 C6orf141Q5SZD1 244 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 LRRTM1Q86UE6 522 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 MRAPQ8TCY5 172 aa21.92■■□□□ 1.1
HOXB3-211ENST00000490677 CD1BP29016 333 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 TMEM30BQ3MIR4 351 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 C6orf183Q5T699 404 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 SLC35E3Q7Z769 313 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 STPG2Q8N412 459 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 OR2T10Q8NGZ9 312 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 MRPL30Q8TCC3 161 aaKnown RBP21.91■■□□□ 1.1
HOXB3-211ENST00000490677 THRSPQ92748 146 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 ABCG5Q9H222 651 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 NKX1-2Q9UD57 310 aaPredicted RBP21.91■■□□□ 1.1
HOXB3-211ENST00000490677 ERGIC3Q9Y282 383 aa21.91■■□□□ 1.1
HOXB3-211ENST00000490677 SERPINE3A8MV23 424 aa21.9■■□□□ 1.1
HOXB3-211ENST00000490677 SPINT2O43291 252 aa21.9■■□□□ 1.1
HOXB3-211ENST00000490677 CD37P11049 281 aa21.9■■□□□ 1.1
HOXB3-211ENST00000490677 MAPK3P27361 379 aaPredicted RBP21.9■■□□□ 1.1
HOXB3-211ENST00000490677 SLC35A2P78381 396 aa21.9■■□□□ 1.1
HOXB3-211ENST00000490677 ACSM3Q53FZ2 586 aa21.9■■□□□ 1.1
HOXB3-211ENST00000490677 OR2W3Q7Z3T1 314 aa21.9■■□□□ 1.1
HOXB3-211ENST00000490677 OR10V1Q8NGI7 309 aa21.9■■□□□ 1.1
HOXB3-211ENST00000490677 FAM46BQ96A09 425 aa21.9■■□□□ 1.1
HOXB3-211ENST00000490677 RCC1LQ96I51 464 aaKnown RBP21.9■■□□□ 1.1
HOXB3-211ENST00000490677 LIN7CQ9NUP9 197 aaKnown RBP21.9■■□□□ 1.1
HOXB3-211ENST00000490677 UBE2QL1A1L167 161 aa21.89■■□□□ 1.09
HOXB3-211ENST00000490677 PDCD6O75340 191 aa21.89■■□□□ 1.09
HOXB3-211ENST00000490677 GPR12P47775 334 aa21.89■■□□□ 1.09
HOXB3-211ENST00000490677 GNMTQ14749 295 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms