RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SLC22A20A6NK97 555 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 SOX15O60248 233 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 CBR3O75828 277 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 B4GALT1P15291 398 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 RND2P52198 227 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 PAX9P55771 341 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 CLDN15P56746 228 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 RAC3P60763 192 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 SLC25A26Q70HW3 274 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 MRPL52Q86TS9 123 aaKnown RBP16.73■□□□□ 0.27
HMG20B-213ENST00000488973 H1FOOQ8IZA3 346 aaPredicted RBP16.73■□□□□ 0.27
HMG20B-213ENST00000488973 OR5D13Q8NGL4 314 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 PACRGQ96M98 296 aaPredicted RBP16.73■□□□□ 0.27
HMG20B-213ENST00000488973 ACTR3CQ9C0K3 210 aaPredicted RBP16.73■□□□□ 0.27
HMG20B-213ENST00000488973 OR2H1Q9GZK4 316 aa16.73■□□□□ 0.27
HMG20B-213ENST00000488973 LOC102723996A0A087X1L8 192 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 CIDEAO60543 219 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 TUSC2O75896 110 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 NAPSAO96009 420 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 CELA2AP08217 269 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 PATE4P0C8F1 98 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 FABP4P15090 132 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 NPBWR2P48146 333 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 C1orf87Q8N0U7 546 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 FAM210BQ96KR6 192 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 DMRTA1Q5VZB9 504 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 OR2T2Q6IF00 324 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 P4HA3Q7Z4N8 544 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 OR10A7Q8NGE5 316 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 DNASE2BQ8WZ79 361 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 NAT6Q93015 286 aa16.72■□□□□ 0.27
HMG20B-213ENST00000488973 CISD1Q9NZ45 108 aaKnown RBP16.72■□□□□ 0.27
HMG20B-213ENST00000488973 H0Y980 276 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 SCTP09683 121 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 TRGC1P0CF51 173 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 NTF4P34130 210 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 PCBD1P61457 104 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 GFI1BQ5VTD9 330 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A2PQ658T7 463 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 THNSL2Q86YJ6 484 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 RNASEH2CQ8TDP1 164 aaKnown RBP16.71■□□□□ 0.27
HMG20B-213ENST00000488973 AKIRIN1Q9H9L7 192 aaPredicted RBP16.71■□□□□ 0.27
HMG20B-213ENST00000488973 TRIOBPQ9H2D6 2365 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 CNTRLQ7Z7A1 2325 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 TNRC6BQ9UPQ9 1833 aaKnown RBP16.71■□□□□ 0.27
HMG20B-213ENST00000488973 SDK1Q7Z5N4 2213 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 IGKV1D-13A0A0B4J2D9 117 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 IGHV5-10-1A0A0J9YXX1 117 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 A0A1W2PPQ1 181 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 RPLP1P05386 114 aaKnown RBP16.71■□□□□ 0.27
HMG20B-213ENST00000488973 IGKV1-13P0DP09 117 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 RNPS1Q15287 305 aaKnown RBP16.71■□□□□ 0.27
HMG20B-213ENST00000488973 SLC24A4Q8NFF2 622 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 ABHD5Q8WTS1 349 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 SPSB4Q96A44 273 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 SH2D2AQ9NP31 389 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 TAAR3PQ9P1P4 343 aa16.71■□□□□ 0.27
HMG20B-213ENST00000488973 PRUNE2Q8WUY3 3088 aa16.71■□□□□ 0.26
HMG20B-213ENST00000488973 KIR2DS1A0A191URI9 304 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 A0A1W2PQM1 296 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 LNP1A1A4G5 178 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 CLDN34H7C241 214 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 IFNA5P01569 189 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 CTXN2P0C2S0 81 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 KIR2DS4P43632 304 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 KIR2DS1Q14954 304 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 FRZBQ92765 325 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 ALKBH3Q96Q83 286 aaPredicted RBP16.7■□□□□ 0.26
HMG20B-213ENST00000488973 FOXB1Q99853 325 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 WDR54Q9H977 334 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 PIGBOS1A0A0B4J2F0 54 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 A0A1B0GU03 582 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 CYB5R3P00387 301 aaPredicted RBP16.7■□□□□ 0.26
HMG20B-213ENST00000488973 CDKN1BP46527 198 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 RAB11AP62491 216 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 HERPUD1Q15011 391 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 RCC1LQ96I51 464 aaKnown RBP16.7■□□□□ 0.26
HMG20B-213ENST00000488973 GPHA2Q96T91 129 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 CCL28Q9NRJ3 127 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 GNG13Q9P2W3 67 aa16.7■□□□□ 0.26
HMG20B-213ENST00000488973 IGHV1-45A0A0A0MS14 117 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 CCDC163A0A0D9SF12 145 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 G3V3Y1 287 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 SLC25A6P12236 298 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 SSR4P51571 173 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 GUSBP11Q6P575 273 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 AAED1Q7RTV5 226 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 IMMP1LQ96LU5 166 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 IL17BQ9UHF5 180 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 ZNF716A6NP11 495 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 K7ESF4 209 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 GZMBP10144 247 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 BCL2P10415 239 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 CXCL12P48061 93 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 CARD18P57730 90 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 CCL7P80098 99 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 UBALD2Q8IYN6 164 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 BATF2Q8N1L9 274 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 OR2V1Q8NHB1 315 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 FGFBP3Q8TAT2 258 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms