RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 Q6ZPA2 131 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 LYPD6Q86Y78 171 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 CDH26Q8IXH8 852 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 PRR18Q8N4B5 295 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 WFDC9Q8NEX5 89 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 TFAP2CQ92754 450 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 PHF21AQ96BD5 680 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 NOL4LQ96MY1 436 aaPredicted RBP9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 FKBP14Q9NWM8 211 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 RCC2Q9P258 522 aaKnown RBP9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.9
CCHCR1-215ENST00000488920 UBE2QL1A1L167 161 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 LINC01548A6NM66 108 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 NCBP2LA6PVI3 153 aaKnown RBP9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 SLC31A2O15432 143 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 SPINT2O43291 252 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 PF4P02776 101 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 RCC1P18754 421 aaPredicted RBP9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 FUT3P21217 361 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 ZNF816Q0VGE8 651 aaPredicted RBP9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 ACSM3Q53FZ2 586 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 FAM27D1Q5T7N8 215 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 LINC00311Q8N616 119 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 C8orf31Q8N9H6 132 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 OR10V1Q8NGI7 309 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 OR1L1Q8NH94 360 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 FAM46BQ96A09 425 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 RBMXL1Q96E39 390 aaKnown RBP9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 VCXQ9H320 206 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 NECAP2Q9NVZ3 263 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 GNG12Q9UBI6 72 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 NKX1-2Q9UD57 310 aaPredicted RBP9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 NOTCH3Q9UM47 2321 aa9.45□□□□□ -0.9
CCHCR1-215ENST00000488920 SERPINE3A8MV23 424 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 ZNF736B4DX44 427 aaPredicted RBP9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 FGF16O43320 207 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 HBZP02008 142 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 CDK1P06493 297 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 MAPK3P27361 379 aaPredicted RBP9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 ZNF134P52741 427 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 GP2P55259 537 aaKnown RBP9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 GABPB1Q06547 395 aaPredicted RBP9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 EBI3Q14213 229 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 CT45A1Q5HYN5 189 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 C6orf141Q5SZD1 244 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 C6orf183Q5T699 404 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 FOXB2Q5VYV0 432 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 SIGIRRQ6IA17 410 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 UNQ9370/PRO34162Q6UXP9 181 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 REC114Q7Z4M0 266 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 C5orf24Q7Z6I8 188 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 CT45A3Q8NHU0 189 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 RTN4IP1Q8WWV3 396 aaPredicted RBP9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 ST6GALNAC6Q969X2 333 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 Q96M66 194 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 UQCC2Q9BRT2 126 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 TMED9Q9BVK6 235 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 PLXNB1O43157 2135 aa9.44□□□□□ -0.9
CCHCR1-215ENST00000488920 FAM90A10PA6NDY2 464 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 FAM90A7PA6NKC0 464 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 FAM90A23PA8MXZ1 464 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 H0YHG0 523 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 IL3RAP26951 378 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 GPR50Q13585 617 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 SPHARQ15513 63 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 RNLSQ5VYX0 342 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 OR10K2Q6IF99 312 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 SLC25A48Q6ZT89 311 aaKnown RBP9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 CEACAM19Q7Z692 300 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 SLC35E3Q7Z769 313 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 LRRTM1Q86UE6 522 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 GAPTQ8N292 157 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 Q8N6K4 173 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 NKAIN3Q8N8D7 197 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 ZNF439Q8NDP4 499 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 OR2T10Q8NGZ9 312 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 MRAPQ8TCY5 172 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 CHPT1Q8WUD6 406 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 THRSPQ92748 146 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 MND1Q9BWT6 205 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 TAF9BQ9HBM6 251 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 OR2S2Q9NQN1 319 aa9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 AURKAIP1Q9NWT8 199 aaPredicted RBP9.43□□□□□ -0.9
CCHCR1-215ENST00000488920 PDCD6O75340 191 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 CA11O75493 328 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 SC5DO75845 299 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 MPIG6BO95866 241 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 MOSP00540 346 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 IGHG2P01859 326 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 GLAP06280 429 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 CD1BP29016 333 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 NKAPLQ5M9Q1 402 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 TRAT1Q6PIZ9 186 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 C18orf65Q6ZTR6 163 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 TGIF2LXQ8IUE1 241 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 FOXRED2Q8IWF2 684 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 IZUMO1Q8IYV9 350 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 MS4A15Q8N5U1 240 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms