RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 GPR35Q9HC97 309 aa15.6■□□□□ 0.09
COL16A1-215ENST00000488897 SLC7A10Q9NS82 523 aa15.6■□□□□ 0.09
COL16A1-215ENST00000488897 PARPBPQ9NWS1 579 aa15.6■□□□□ 0.09
COL16A1-215ENST00000488897 CSMD2Q7Z408 3487 aa15.6■□□□□ 0.09
COL16A1-215ENST00000488897 A0A1W2PR80 420 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 OR7C1O76099 320 aaPredicted RBP15.59■□□□□ 0.09
COL16A1-215ENST00000488897 SNRNP70P08621 437 aaKnown RBP15.59■□□□□ 0.09
COL16A1-215ENST00000488897 LMO1P25800 156 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM214BQ7L5A3 538 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 ZNF561Q8N587 486 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 HSD17B11Q8NBQ5 300 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FGFBP3Q8TAT2 258 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 SPSB4Q96A44 273 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 TP53RKQ96S44 253 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A10PA6NDY2 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A18PA6NE21 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A16PA6NEW6 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A20PA6NIJ5 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A8PA6NJQ4 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A7PA6NKC0 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A27PA6NNH2 459 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A22PA8MWA6 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A12PA8MX19 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A5PA8MXJ8 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A23PA8MXZ1 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 TRDCB7Z8K6 153 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 M0R036 132 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 MRPL33O75394 65 aaKnown RBP15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A15PP0C7V4 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A13PP0C7W8 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A14PP0C7W9 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FAM90A24PP0C7X0 464 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 FHITP49789 147 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 PDCD1Q15116 288 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 MEX3BQ6ZN04 569 aaKnown RBP15.59■□□□□ 0.09
COL16A1-215ENST00000488897 Q6ZS49 121 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 ZNF611Q8N823 705 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 BOD1Q96IK1 185 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 SPIN2AQ99865 258 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 SPIN2BQ9BPZ2 258 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 TMEM222Q9H0R3 208 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 SH3BGRL3Q9H299 93 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 IFT22Q9H7X7 185 aa15.59■□□□□ 0.09
COL16A1-215ENST00000488897 NBPF19A0A087WUL8 3843 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 A0A1B0GW64 132 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 RPL36A-HNRNPH2H7BZ11 118 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 HOXB1P14653 301 aaPredicted RBP15.58■□□□□ 0.09
COL16A1-215ENST00000488897 AKR1C3P42330 323 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 EWSR1Q01844 656 aaKnown RBP eCLIP15.58■□□□□ 0.09
COL16A1-215ENST00000488897 SRSF1Q07955 248 aaKnown RBP eCLIP15.58■□□□□ 0.09
COL16A1-215ENST00000488897 ZNF266Q14584 549 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 DPPA2Q7Z7J5 298 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 OR2C3Q8N628 320 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 Q8NFD4 153 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 C1QTNF5Q9BXJ0 243 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 SLC35B3Q9H1N7 401 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 SMDT1Q9H4I9 107 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 KCNJ16Q9NPI9 418 aa15.58■□□□□ 0.09
COL16A1-215ENST00000488897 TACC2O95359 2948 aa15.58■□□□□ 0.08
COL16A1-215ENST00000488897 ZNF44P15621 663 aa15.58■□□□□ 0.08
COL16A1-215ENST00000488897 SNRPEP62304 92 aaKnown RBP15.58■□□□□ 0.08
COL16A1-215ENST00000488897 SRSF7Q16629 238 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL16A1-215ENST00000488897 Q6ZPA2 131 aa15.58■□□□□ 0.08
COL16A1-215ENST00000488897 SLC25A26Q70HW3 274 aa15.58■□□□□ 0.08
COL16A1-215ENST00000488897 CALHM1Q8IU99 346 aa15.58■□□□□ 0.08
COL16A1-215ENST00000488897 UMAD1C9J7I0 102 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 CEACAM8P31997 349 aaPredicted RBP15.57■□□□□ 0.08
COL16A1-215ENST00000488897 CASP6P55212 293 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 RND1Q92730 232 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 GMPPAQ96IJ6 420 aaPredicted RBP15.57■□□□□ 0.08
COL16A1-215ENST00000488897 TMEM56Q96MV1 263 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 C11orf1Q9H5F2 150 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 UBE2J1Q9Y385 318 aaPredicted RBP15.57■□□□□ 0.08
COL16A1-215ENST00000488897 TMEM56-RWDD3S4R434 201 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 PRSS44E7EML9 344 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 S100A6P06703 90 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 MMP7P09237 267 aaPredicted RBP15.57■□□□□ 0.08
COL16A1-215ENST00000488897 GNRHRP30968 328 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 NKX2-1P43699 371 aaPredicted RBP15.57■□□□□ 0.08
COL16A1-215ENST00000488897 RND3P61587 244 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 RHEBQ15382 184 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 NRN1LQ496H8 165 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 IGSF11Q5DX21 431 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 ZNF695Q8IW36 515 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 OR1J1Q8NGS3 322 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 ABHD14BQ96IU4 210 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 VKORC1Q9BQB6 163 aa15.57■□□□□ 0.08
COL16A1-215ENST00000488897 A0A096LPE4 126 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 A0A1W2PPZ6 126 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 K7N7A8 449 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 LYZL6O75951 148 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 RNPS1Q15287 305 aaKnown RBP15.56■□□□□ 0.08
COL16A1-215ENST00000488897 ZNF474Q6S9Z5 364 aaPredicted RBP15.56■□□□□ 0.08
COL16A1-215ENST00000488897 TMEM182Q6ZP80 229 aaPredicted RBP15.56■□□□□ 0.08
COL16A1-215ENST00000488897 C22orf34Q6ZV56 151 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 SLC25A31Q9H0C2 315 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 ATPIF1Q9UII2 106 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 CELSR2Q9HCU4 2923 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 ZNF587BE7ETH6 402 aa15.56■□□□□ 0.08
COL16A1-215ENST00000488897 SS18L1O75177 396 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms