RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 FAM25CB3EWG5 89 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 FAM25GB3EWG6 89 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 C12orf77C9JDV5 145 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 NPIPB11E5RHQ5 1161 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 H3BMQ9 156 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 TCF21O43680 179 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 NAPSAO96009 420 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 HBZP02008 142 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 GSTP1P09211 210 aaKnown RBP12.83□□□□□ -0.36
C9orf3-219ENST00000488186 MNDAP41218 407 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 GNG2P59768 71 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 OLFML2AQ68BL7 652 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 HCP5Q6MZN7 132 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 ZNF554Q86TJ5 538 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 SIGLECL1Q8N7X8 197 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 OR1L1Q8NH94 360 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 GALMQ96C23 342 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 SLC25A38Q96DW6 304 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 CYYR1Q96J86 154 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 HDHD3Q9BSH5 251 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-219ENST00000488186 ABCG5Q9H222 651 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 LINC00574Q9H8X3 128 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 MBNL3Q9NUK0 354 aaKnown RBP12.83□□□□□ -0.36
C9orf3-219ENST00000488186 GNG12Q9UBI6 72 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 RSL24D1Q9UHA3 163 aaKnown RBP12.83□□□□□ -0.36
C9orf3-219ENST00000488186 DSCAML1Q8TD84 2053 aa12.83□□□□□ -0.36
C9orf3-219ENST00000488186 A0A0U1RQK1 487 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 POM121CA8CG34 1229 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 C15orf65H3BRN8 121 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 MFNGO00587 321 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 RGS5O15539 181 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 IGHV3-7P01780 117 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 FBP1P09467 338 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 SAA4P35542 130 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 GDNFP39905 211 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 PITPNAQ00169 270 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 BAMBIQ13145 260 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 DEFB112Q30KQ8 113 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 TMEM30BQ3MIR4 351 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 BAIAP2L2Q6UXY1 529 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 IZUMO1Q8IYV9 350 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 OR11H6Q8NGC7 330 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 OR52M1Q8NGK5 317 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 IL1F10Q8WWZ1 152 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 CMTM3Q96MX0 182 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 OR2S2Q9NQN1 319 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 NDUFA13Q9P0J0 144 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 KCNK7Q9Y2U2 307 aa12.82□□□□□ -0.36
C9orf3-219ENST00000488186 SOX21Q9Y651 276 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-219ENST00000488186 TRBV6-6A0A0A6YYG2 114 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 IGHV3-43A0A0B4J1X8 118 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 TMEM235A6NFC5 223 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 XRCC3O43542 346 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 APOA1P02647 267 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 IGHV3-43DP0DP04 118 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 GNG10P50151 68 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 PNLIPRP3Q17RR3 467 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 ZNF260Q3ZCT1 412 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 TMEM69Q5SWH9 247 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 HACD4Q5VWC8 232 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 DTX3Q8N9I9 347 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 OR9G1Q8NH87 305 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 LEAP2Q969E1 77 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 CREB3L1Q96BA8 519 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 ZNF286AQ9HBT8 521 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 Q9N2K0 584 aa12.81□□□□□ -0.36
C9orf3-219ENST00000488186 CCDC59Q9P031 241 aaKnown RBP12.81□□□□□ -0.36
C9orf3-219ENST00000488186 TBL2Q9Y4P3 447 aaKnown RBP12.81□□□□□ -0.36
C9orf3-219ENST00000488186 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 MDFIC2A0A1B0GVS7 189 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 F2RL2O00254 374 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 HSPA12AO43301 675 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 HPGDSO60760 199 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 RGS11O94810 467 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 HTR1DP28221 377 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 HMGN3Q15651 99 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 ZNF626Q68DY1 528 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 ZNF880Q6PDB4 577 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 OR10V1Q8NGI7 309 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 OR10X1Q8NGY0 326 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 DYNC2LI1Q8TCX1 351 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 ST6GALNAC5Q9BVH7 336 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.8□□□□□ -0.36
C9orf3-219ENST00000488186 GFOD1Q9NXC2 390 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 ADAM30Q9UKF2 790 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 PSG11Q9UQ72 335 aa12.8□□□□□ -0.36
C9orf3-219ENST00000488186 MRPS7Q9Y2R9 242 aaKnown RBP12.8□□□□□ -0.36
C9orf3-219ENST00000488186 AMMECR1Q9Y4X0 333 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-219ENST00000488186 A0A087X0M5 115 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 A0A1B0GX30 115 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 BTBD17A6NE02 478 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 J3QR06 171 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 EIF4EP06730 217 aaKnown RBP12.79□□□□□ -0.36
C9orf3-219ENST00000488186 FCGR3AP08637 254 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 CD34P28906 385 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 CEACAM3P40198 252 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 KIR2DS4P43632 304 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms