RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 FOXL1Q12952 345 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 FAM53BQ14153 422 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF726P1Q15940 193 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 EXT1Q16394 746 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PSG3Q16557 428 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PRICKLE4Q2TBC4 344 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SMIM21Q3B7S5 101 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SPATA45Q537H7 98 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 LRRC10Q5BKY1 277 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 LYZL2Q7Z4W2 148 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR5AS1Q8N127 324 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 C17orf78Q8N4C9 275 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 KLHDC1Q8N7A1 406 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SYT8Q8NBV8 401 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR5AU1Q8NGC0 362 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR5C1Q8NGR4 320 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 VN1R17PQ8TDU5 208 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM234Q8WY98 164 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 DAZLQ92904 295 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ARRDC3Q96B67 414 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ADAT3Q96EY9 351 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SPIN2AQ99865 258 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SPIN2BQ9BPZ2 258 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 MACROD1Q9BQ69 325 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 HSPB9Q9BQS6 159 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TM2D1Q9BX74 207 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 UBE2ZQ9H832 354 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 FAM206AQ9NX38 181 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 LSM7Q9UK45 103 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PPIAL4AQ9Y536 164 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR1A2Q9Y585 309 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 MPDZO75970 2070 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 A0A1B0GUS0 222 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 A0A1W2PRS3 328 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 LINC01553A4QN01 128 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 K7ESM1 405 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 SNRNP200O75643 2136 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 IGKV1D-16P01601 117 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 HLA-HP01893 362 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 TTRP02766 147 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 WNT2P09544 360 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 FTH1P19P0C7X4 201 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 SMIM10L1P0DMW3 83 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 VIPR2P41587 438 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 NKX2-1P43699 371 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 NPBWR2P48146 333 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 LHX2P50458 406 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 DYNLT3P51808 116 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 BIDP55957 195 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 BTN3A2P78410 334 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 ARG2P78540 354 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 RUNX1Q01196 453 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 EGR4Q05215 589 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 Q0VG73 95 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 ARFRP1Q13795 201 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 EXOSC7Q15024 291 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 MSMO1Q15800 293 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 SNAI3Q3KNW1 292 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 WBP2NLQ6ICG8 309 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 GLIPR1L1Q6UWM5 242 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 PET117Q6UWS5 81 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 ASCL4Q6XD76 172 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 Q6ZN92 141 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 SEM1Q6ZVN7 128 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 ERN2Q76MJ5 926 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 VN1R4Q7Z5H5 301 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 LRP11Q86VZ4 500 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 MUC15Q8N387 334 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 METTL27Q8N6F8 245 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM217Q8N7C4 229 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 RNF152Q8N8N0 203 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF709Q8N972 641 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZIC4Q8N9L1 334 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 NECAP1Q8NC96 275 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR5D14Q8NGL3 314 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF721Q8TF20 911 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 RTN4IP1Q8WWV3 396 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 NUS1Q96E22 293 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 NEIL1Q96FI4 390 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 SMIM10Q96HG1 83 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 COX14Q96I36 57 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 LOXL4Q96JB6 756 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 TXN2Q99757 166 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 MTIF3Q9H2K0 278 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 LYRM4Q9HD34 91 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 RPRMQ9NS64 109 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF586Q9NXT0 402 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 IL19Q9UHD0 177 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 DAPP1Q9UN19 280 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 TRAPPC1Q9Y5R8 145 aa4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 POLR2AP24928 1970 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-213ENST00000488131 SERINC4A6NH21 518 aa4.05□□□□□ -1.76
CDC42BPA-213ENST00000488131 CEBPZOSA8MTT3 80 aa4.05□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF814B7Z6K7 855 aa4.05□□□□□ -1.76
CDC42BPA-213ENST00000488131 P2RY10O00398 339 aa4.05□□□□□ -1.76
CDC42BPA-213ENST00000488131 LATO43561 262 aa4.05□□□□□ -1.76
CDC42BPA-213ENST00000488131 SERF1AO75920 110 aa4.05□□□□□ -1.76
CDC42BPA-213ENST00000488131 STATHP02808 62 aa4.05□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF728P0DKX0 622 aa4.05□□□□□ -1.76
CDC42BPA-213ENST00000488131 MSR1P21757 451 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms