RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 FGF16O43320 207 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 CHP2O43745 196 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 TPST2O60704 377 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 NPPAP01160 153 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 ACSM4P0C7M7 580 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 UMPSP11172 480 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 CTLA4P16410 223 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 HTR1DP28221 377 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 MC5RP33032 325 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 TAGLN2P37802 199 aaKnown RBP3.3□□□□□ -1.88
BRCA1-217ENST00000487825 SERPINB9P50453 376 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 PRRX1P54821 245 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 LSM6P62312 80 aaKnown RBP3.3□□□□□ -1.88
BRCA1-217ENST00000487825 ACTA2P62736 377 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 ACTG2P63267 376 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 ACTC1P68032 377 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 ACTA1P68133 377 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 PITPNAQ00169 270 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 KIAA0141Q14154 515 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-217ENST00000487825 RSPO1Q2MKA7 263 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-217ENST00000487825 CEACAM19Q7Z692 300 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 LYG2Q86SG7 212 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF679Q8IYX0 411 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 TRIML2Q8N7C3 387 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF671Q8TAW3 534 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 SDSLQ96GA7 329 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 C5orf30Q96GV9 206 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 INTS14Q96SY0 518 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF426Q9BUY5 554 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 PLEKHA3Q9HB20 300 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 BCL2L10Q9HD36 194 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 RPRD1BQ9NQG5 326 aaKnown RBP3.3□□□□□ -1.88
BRCA1-217ENST00000487825 IL20Q9NYY1 176 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 BTNL2Q9UIR0 455 aa3.3□□□□□ -1.88
BRCA1-217ENST00000487825 STRAPQ9Y3F4 350 aaKnown RBP3.3□□□□□ -1.88
BRCA1-217ENST00000487825 FAM230AA0A1W2PPH8 454 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 SMIM30A4D0T7 59 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 GGT3PA6NGU5 568 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 KPNA4O00629 521 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-217ENST00000487825 AKR7A2O43488 359 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 LYPD3O95274 346 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 FGF4P08620 206 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 ABHD2P08910 425 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF728P0DKX0 622 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 MYL2P10916 166 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 PSG2P11465 335 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 AQP2P41181 271 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 CDKN2CP42773 168 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 GABRA2P47869 451 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 RGS8P57771 180 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-217ENST00000487825 DNAJB13P59910 316 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 DSTNP60981 165 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 ESRRGP62508 458 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 HIST1H3AP68431 136 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF92Q03936 586 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 OPCMLQ14982 345 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 KCTD21Q4G0X4 260 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 SPANXN4Q5MJ08 99 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 HIST2H3PS2Q5TEC6 136 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 OTPQ5XKR4 325 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 TTC33Q6PID6 262 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-217ENST00000487825 DHRS4L2Q6PKH6 230 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 BAIAP2L2Q6UXY1 529 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 ZBTB49Q6ZSB9 765 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 HIST2H3AQ71DI3 136 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 CCDC80Q76M96 950 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 TIGD4Q8IY51 512 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF491Q8N8L2 437 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 EIF1ADQ8N9N8 165 aaKnown RBP3.29□□□□□ -1.88
BRCA1-217ENST00000487825 CYB561A3Q8NBI2 242 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 OR4M1Q8NGD0 313 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 OR2T27Q8NH04 317 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 OR8S1Q8NH09 359 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 TESCQ96BS2 214 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 TPD52L3Q96J77 140 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 ATP6V1G3Q96LB4 118 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 PANX1Q96RD7 426 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 NAPGQ99747 312 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-217ENST00000487825 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 EGLN3Q9H6Z9 239 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 MEPEQ9NQ76 525 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-217ENST00000487825 SMPD3Q9NY59 655 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-217ENST00000487825 DPM3Q9P2X0 92 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 EMCNQ9ULC0 261 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 APLNQ9ULZ1 77 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 VSIG4Q9Y279 399 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 GMEB1Q9Y692 573 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 NACAE9PAV3 2078 aa3.29□□□□□ -1.88
BRCA1-217ENST00000487825 IGLV4-3A0A075B6K6 122 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 F5H5K5 113 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 F8WDY8 70 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 LINC01619G3V211 115 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 H0Y980 276 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 SSX5O60225 188 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 SNX3O60493 162 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 TPST1O60507 370 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 OR5F1O95221 314 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 KRT75O95678 551 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 AADACP22760 399 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 PHBP35232 272 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms