RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 MND1Q9BWT6 205 aa15.16■□□□□ 0.02
CLIP2-206ENST00000487091 SELENOIQ9C0D9 397 aa15.16■□□□□ 0.02
CLIP2-206ENST00000487091 BANF2Q9H503 90 aa15.16■□□□□ 0.02
CLIP2-206ENST00000487091 TRAPPC2LQ9UL33 140 aa15.16■□□□□ 0.02
CLIP2-206ENST00000487091 PEX16Q9Y5Y5 336 aa15.16■□□□□ 0.02
CLIP2-206ENST00000487091 IGHV1-3A0A0C4DH29 117 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 A0A1W2PRX2 142 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 C12orf77C9JDV5 145 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 SPINT2O43291 252 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 SC5DO75845 299 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 IGKV1D-33P01593 117 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 IGKV1-33P01594 117 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 ACSM3Q53FZ2 586 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 C6orf183Q5T699 404 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 TRAT1Q6PIZ9 186 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 TMEM104Q8NE00 496 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 WFDC9Q8NEX5 89 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 MYDGFQ969H8 173 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 ST6GALNAC6Q969X2 333 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 Q96M66 194 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 SCN3BQ9NY72 215 aa15.15■□□□□ 0.02
CLIP2-206ENST00000487091 PTGES3LE9PB15 166 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 CRTAPO75718 401 aaPredicted RBP15.14■□□□□ 0.01
CLIP2-206ENST00000487091 IL3RAP26951 378 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 HNF4GQ14541 408 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 SPHARQ15513 63 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 OXLD1Q5BKU9 147 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 REC114Q7Z4M0 266 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 MOB3BQ86TA1 216 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 OR4K15Q8NH41 348 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 UBALD1Q8TB05 177 aa15.14■□□□□ 0.01
CLIP2-206ENST00000487091 NKX1-2Q9UD57 310 aaPredicted RBP15.14■□□□□ 0.01
CLIP2-206ENST00000487091 IGHV3-43A0A0B4J1X8 118 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 H0YHG0 523 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 UBBP0CG47 229 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 IGHV3-43DP0DP04 118 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 PF4V1P10720 104 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 GP2P55259 537 aaKnown RBP15.13■□□□□ 0.01
CLIP2-206ENST00000487091 GABPB1Q06547 395 aaPredicted RBP15.13■□□□□ 0.01
CLIP2-206ENST00000487091 GPR50Q13585 617 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 SIGIRRQ6IA17 410 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 C10orf99Q6UWK7 81 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 ZNF554Q86TJ5 538 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 IZUMO1Q8IYV9 350 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 RTN4IP1Q8WWV3 396 aaPredicted RBP15.13■□□□□ 0.01
CLIP2-206ENST00000487091 PHYHIPQ92561 330 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 CST11Q9H112 138 aa15.13■□□□□ 0.01
CLIP2-206ENST00000487091 LSM2Q9Y333 95 aaKnown RBP15.13■□□□□ 0.01
CLIP2-206ENST00000487091 PSMB11A5LHX3 300 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 PDCD6O75340 191 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 HBZP02008 142 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 CD1BP29016 333 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 REG1BP48304 166 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 ZNF137PP52743 207 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 INSL4Q14641 139 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 STEAP3Q658P3 488 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 GLT8D1Q68CQ7 371 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 FAM53AQ6NSI3 398 aaPredicted RBP15.12■□□□□ 0.01
CLIP2-206ENST00000487091 SLC25A48Q6ZT89 311 aaKnown RBP15.12■□□□□ 0.01
CLIP2-206ENST00000487091 ZNF439Q8NDP4 499 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 OR2T10Q8NGZ9 312 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 CHPT1Q8WUD6 406 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 EAF1Q96JC9 268 aaPredicted RBP15.12■□□□□ 0.01
CLIP2-206ENST00000487091 MBNL3Q9NUK0 354 aaKnown RBP15.12■□□□□ 0.01
CLIP2-206ENST00000487091 GNG12Q9UBI6 72 aa15.12■□□□□ 0.01
CLIP2-206ENST00000487091 TXNL1O43396 289 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 IGHG2P01859 326 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 CD37P11049 281 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 RCC1P18754 421 aaPredicted RBP15.11■□□□□ 0.01
CLIP2-206ENST00000487091 CD33P20138 364 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 VHLP40337 213 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 SLC35A2P78381 396 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 IRF3Q14653 427 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 CT45A1Q5HYN5 189 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 C1orf100Q5SVJ3 147 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 FAM27D1Q5T7N8 215 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 LRRTM1Q86UE6 522 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 Q8N6K4 173 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 OR1L1Q8NH94 360 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 CT45A3Q8NHU0 189 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 FAM46BQ96A09 425 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 TMED9Q9BVK6 235 aa15.11■□□□□ 0.01
CLIP2-206ENST00000487091 IGHV3-72A0A0B4J1Y9 119 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 UBE2QL1A1L167 161 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 SLC31A2O15432 143 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 SRMP19623 302 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 ZNF134P52741 427 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 AQP4P55087 323 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 MED22Q15528 200 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 SLC35E3Q7Z769 313 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 TGIF2LXQ8IUE1 241 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 PRR18Q8N4B5 295 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 NRG4Q8WWG1 115 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 TAF9BQ9HBM6 251 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 NECAP2Q9NVZ3 263 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 KCNIP1Q9NZI2 227 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 TPRKBQ9Y3C4 175 aa15.1■□□□□ 0.01
CLIP2-206ENST00000487091 SERPINE3A8MV23 424 aa15.09■□□□□ 0.01
CLIP2-206ENST00000487091 MPIG6BO95866 241 aa15.09■□□□□ 0.01
CLIP2-206ENST00000487091 PF4P02776 101 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms