RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 TUSC2O75896 110 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 PPYP01298 95 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 PGAM2P15259 253 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 NRGNQ92686 78 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 ARL11Q969Q4 196 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 MOB3AQ96BX8 217 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 C14orf79Q96F83 325 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 PARP12Q9H0J9 701 aaKnown RBP11.95□□□□□ -0.5
COL9A1-207ENST00000486080 OR51J1Q9H342 316 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 CHODLQ9H9P2 273 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 CELSR2Q9HCU4 2923 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 IGKV1D-13A0A0B4J2D9 117 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 NDUFB3O43676 98 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 NDUFA2O43678 99 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 PRAF2O60831 178 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 FSTL3O95633 263 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 IL5P05113 134 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 OR4E1P0C645 316 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF728P0DKX0 622 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 IGKV1-13P0DP09 117 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 AKR1C4P17516 323 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 CD300CQ08708 224 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 CR1LQ2VPA4 569 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 TCF23Q7RTU1 214 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 SLC25A42Q86VD7 318 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 LDLRAD3Q86YD5 345 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 H1FOOQ8IZA3 346 aaPredicted RBP11.95□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF565Q8N9K5 539 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 OR52L2PQ8NGH6 319 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 NEURL2Q9BR09 285 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 ALX4Q9H161 411 aaPredicted RBP11.95□□□□□ -0.5
COL9A1-207ENST00000486080 NCOR1P1Q9H4R4 102 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 C19orf12Q9NSK7 152 aa11.95□□□□□ -0.5
COL9A1-207ENST00000486080 FAM172BPA6NC97 362 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 IGHV4-39P01824 125 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 HEXAP06865 529 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 CGB3P0DN86 165 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 CGB7P0DN87 165 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 IL2RGP31785 369 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 HERV-K104P61576 105 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 GNMTQ14749 295 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 LRRC10Q5BKY1 277 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 METTL11BQ5VVY1 283 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 RAB1CQ92928 201 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 TMEM230Q96A57 120 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 GALMQ96C23 342 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 TIMD4Q96H15 378 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 OR6C3Q9NZP0 311 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 PTPN13Q12923 2485 aa11.94□□□□□ -0.5
COL9A1-207ENST00000486080 FBN2P35556 2912 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 IGHV3-43A0A0B4J1X8 118 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 NPIPB11E5RHQ5 1161 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 HSPA12AO43301 675 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 DIRAS3O95661 229 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 IGHV3-43DP0DP04 118 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 GZMHP20718 246 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 OMGP23515 440 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 CEACAM6P40199 344 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 TMEM33P57088 247 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 PPP1R1AQ13522 171 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 SURF2Q15527 256 aaPredicted RBP11.93□□□□□ -0.5
COL9A1-207ENST00000486080 LTC4SQ16873 150 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 TRAT1Q6PIZ9 186 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 MUC20Q8N307 709 aaPredicted RBP11.93□□□□□ -0.5
COL9A1-207ENST00000486080 H1FXQ92522 213 aaKnown RBP11.93□□□□□ -0.5
COL9A1-207ENST00000486080 SCGB3A2Q96PL1 93 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 NARFLQ9H6Q4 476 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 RDH8Q9NYR8 311 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF69Q9UC07 566 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 ARID1AO14497 2285 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 TRGV10A0A0A0MS01 117 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 HMX3A6NHT5 357 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 SPINT2O43291 252 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 PPP1CCP36873 323 aaKnown RBP11.93□□□□□ -0.5
COL9A1-207ENST00000486080 ECI1P42126 302 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 UBE2MP61081 183 aaKnown RBP11.93□□□□□ -0.5
COL9A1-207ENST00000486080 RPL31P62899 125 aaKnown RBP11.93□□□□□ -0.5
COL9A1-207ENST00000486080 DHRS2Q13268 280 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 C17orf58Q2M2W7 97 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF626Q68DY1 528 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF841Q6ZN19 808 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF554Q86TJ5 538 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF525Q8N782 197 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 CHAC2Q8WUX2 184 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 CALYQ9NYX4 217 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 OR2W1Q9Y3N9 320 aa11.93□□□□□ -0.5
COL9A1-207ENST00000486080 A8MV72 311 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-207ENST00000486080 SSNA1O43805 119 aa11.92□□□□□ -0.5
COL9A1-207ENST00000486080 CTSDP07339 412 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-207ENST00000486080 RPS2P15880 293 aaKnown RBP11.92□□□□□ -0.5
COL9A1-207ENST00000486080 ZBTB25P24278 435 aa11.92□□□□□ -0.5
COL9A1-207ENST00000486080 UCP3P55916 312 aa11.92□□□□□ -0.5
COL9A1-207ENST00000486080 RRAS2P62070 204 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF273Q14593 569 aa11.92□□□□□ -0.5
COL9A1-207ENST00000486080 PHLDA2Q53GA4 152 aa11.92□□□□□ -0.5
COL9A1-207ENST00000486080 OR10V1Q8NGI7 309 aa11.92□□□□□ -0.5
COL9A1-207ENST00000486080 MED28Q9H204 178 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms