RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PFDN1O60925 122 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-226ENST00000483656 PPYP01298 95 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 HBZP02008 142 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 HEXAP06865 529 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 OR4E1P0C645 316 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 TRAPPC2P0DI81 140 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 TRAPPC2BP0DI82 140 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 IGKV1-13P0DP09 117 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 ZBTB25P24278 435 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 SSTR5P35346 364 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 GLP1RP43220 463 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 UCP3P55916 312 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 RRAS2P62070 204 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-226ENST00000483656 DHODHQ02127 395 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 CBX3Q13185 183 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 FCN2Q15485 313 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 SURF2Q15527 256 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-226ENST00000483656 AVPI1Q5T686 147 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 METTL11BQ5VVY1 283 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 ZNF626Q68DY1 528 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 C14orf79Q96F83 325 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 PARP12Q9H0J9 701 aaKnown RBP8.37□□□□□ -1.07
HDAC6-226ENST00000483656 CLEC4MQ9H2X3 399 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-226ENST00000483656 KCNIP1Q9NZI2 227 aa8.37□□□□□ -1.07
HDAC6-226ENST00000483656 NDUFA2O43678 99 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 DIRAS3O95661 229 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 CTSDP07339 412 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-226ENST00000483656 ZNF728P0DKX0 622 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 COX6B1P14854 86 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 PGAM2P15259 253 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 RPS2P15880 293 aaKnown RBP8.36□□□□□ -1.07
HDAC6-226ENST00000483656 GZMHP20718 246 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 COL8A1P27658 744 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 EFNA4P52798 201 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 EDDM3BP56851 147 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 FXYD4P59646 89 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 PPP1R1AQ13522 171 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 GNMTQ14749 295 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 C17orf58Q2M2W7 97 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 C6orf183Q5T699 404 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 ZNF841Q6ZN19 808 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 ZNF554Q86TJ5 538 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 MUC20Q8N307 709 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-226ENST00000483656 PRR18Q8N4B5 295 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 OR52L2PQ8NGH6 319 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 RFESDQ8TAC1 157 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 ZNF431Q8TF32 576 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-226ENST00000483656 IL1F10Q8WWZ1 152 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 CORO2AQ92828 525 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 ARL11Q969Q4 196 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 ST6GAL2Q96JF0 529 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 SCGB3A2Q96PL1 93 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 RSRP1Q9BUV0 290 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 TOLLIPQ9H0E2 274 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 SLC25A10Q9UBX3 287 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-226ENST00000483656 CREBBPQ92793 2442 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 USP9YO00507 2555 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-226ENST00000483656 KIAA2026Q5HYC2 2103 aa8.36□□□□□ -1.07
HDAC6-226ENST00000483656 USF3Q68DE3 2245 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 C9orf170A2RU37 121 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 A8MV72 311 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-226ENST00000483656 DVL1O14640 695 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 SULT1A3P0DMM9 295 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 SULT1A4P0DMN0 295 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 AKR1C4P17516 323 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 NDUFB7P17568 137 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 GNRHRP30968 328 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 ECI1P42126 302 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 UBE2MP61081 183 aaKnown RBP8.35□□□□□ -1.07
HDAC6-226ENST00000483656 HERV-K104P61576 105 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
HDAC6-226ENST00000483656 DHRS2Q13268 280 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 KCNJ8Q15842 424 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 C2orf68Q2NKX9 166 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 UTF1Q5T230 341 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 CD276Q5ZPR3 534 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 FAHD2BQ6P2I3 314 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-226ENST00000483656 TRAT1Q6PIZ9 186 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 LYG2Q86SG7 212 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 OR11H7Q8NGC8 314 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 OR10J5Q8NHC4 309 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 TOMM40LQ969M1 308 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 FAHD2AQ96GK7 314 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 MED28Q9H204 178 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 LINC00574Q9H8X3 128 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 CHODLQ9H9P2 273 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 GPN1Q9HCN4 374 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-226ENST00000483656 C19orf12Q9NSK7 152 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 RDH8Q9NYR8 311 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 CALYQ9NYX4 217 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 OR6C3Q9NZP0 311 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 ZNF69Q9UC07 566 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 OPN4Q9UHM6 478 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 OR2W1Q9Y3N9 320 aa8.35□□□□□ -1.07
HDAC6-226ENST00000483656 TACC2O95359 2948 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 IGHV3-43A0A0B4J1X8 118 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 FAM172BPA6NC97 362 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 F2RL2O00254 374 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 PPIHO43447 177 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms