RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 HSPA12AO43301 675 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 PFDN1O60925 122 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 HEXAP06865 529 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 ZNF728P0DKX0 622 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 VSIG10L2P0DP72 767 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 NFYAP23511 347 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 ZBTB25P24278 435 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 HTD2P86397 168 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 LYPD2Q6UXB3 125 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 TMED4Q7Z7H5 227 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 SLC38A6Q8IZM9 456 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 OR1L1Q8NH94 360 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 FAM216AQ8WUB2 273 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 IL1F10Q8WWZ1 152 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 DACT3Q96B18 629 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 BEX2Q9BXY8 128 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 TMPRSS13Q9BYE2 586 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 FXYD6Q9H0Q3 95 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 LIME1Q9H400 295 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 BEX1Q9HBH7 125 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 BARX1Q9HBU1 254 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 TAS2R3Q9NYW6 316 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 CTSZQ9UBR2 303 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 UBE2J1Q9Y385 318 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 LINC00312Q9Y6C7 94 aa12.28□□□□□ -0.44
SNRNP200-205ENST00000480835 DOCK11Q5JSL3 2073 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 CREBL2O60519 120 aaPredicted RBP12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 LY6HO94772 140 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 OR4E1P0C645 316 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 CGB3P0DN86 165 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 CGB7P0DN87 165 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 TMEM128Q5BJH2 165 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 ZNF626Q68DY1 528 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 C11orf88Q6PI97 169 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 NLRC3Q7RTR2 1065 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 ZNF295-AS1Q8N0V1 137 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 PRR18Q8N4B5 295 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 NINJ1Q92982 152 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 ZNF486Q96H40 463 aaPredicted RBP12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 C5orf66Q9H5L9 145 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 CALYQ9NYX4 217 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 OR2W1Q9Y3N9 320 aa12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 SMG1Q96Q15 3661 aaKnown RBP12.27□□□□□ -0.45
SNRNP200-205ENST00000480835 TRBV23-1A0A0A0MS06 115 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 F2RL2O00254 374 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 DVL1O14640 695 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 RPS2P15880 293 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 SSTR2P30874 369 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 FXYD4P59646 89 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 RRAS2P62070 204 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 RPL31P62899 125 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 DHODHQ02127 395 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 CBX3Q13185 183 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 C4orf46Q504U0 113 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 AVPI1Q5T686 147 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 CD276Q5ZPR3 534 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 C5orf24Q7Z6I8 188 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 FAM185AQ8N0U4 392 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 OR10A7Q8NGE5 316 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 OR8B3Q8NGG8 313 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 ZNF431Q8TF32 576 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 TOMM40LQ969M1 308 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 PPP1R14BQ96C90 147 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 OR8B2Q96RD0 313 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 SEC22CQ9BRL7 303 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 RTBDNQ9BSG5 229 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 DCTN5Q9BTE1 182 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 RSRP1Q9BUV0 290 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 MED28Q9H204 178 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 LINC00574Q9H8X3 128 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 OR1A1Q9P1Q5 309 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 ZNF221Q9UK13 617 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 JPT1Q9UK76 154 aa12.26□□□□□ -0.45
SNRNP200-205ENST00000480835 KBTBD11-OT1A0A1B0GTJ5 212 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 NDUFS7O75251 213 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 SSTR5P35346 364 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 CEACAM6P40199 344 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 PDLIM4P50479 330 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 LUMP51884 338 aaPredicted RBP12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 CARTPTQ16568 116 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 C11orf91Q3C1V1 193 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 ABCA11PQ4W5N1 156 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 LYG2Q86SG7 212 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 CCDC71LQ8N9Z2 235 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 ADAD2Q8NCV1 583 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 OR10V1Q8NGI7 309 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 CAPSLQ8WWF8 208 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 H1FXQ92522 213 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 SLC5A7Q9GZV3 580 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 GAL3ST2Q9H3Q3 398 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 PATZ1Q9HBE1 687 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 RDH8Q9NYR8 311 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 CLN8Q9UBY8 286 aa12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-205ENST00000480835 F5H0A9 414 aaPredicted RBP12.24□□□□□ -0.45
SNRNP200-205ENST00000480835 FCN3O75636 299 aa12.24□□□□□ -0.45
SNRNP200-205ENST00000480835 RGS11O94810 467 aa12.24□□□□□ -0.45
SNRNP200-205ENST00000480835 IGHV4-39P01824 125 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms