RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 ETV6P41212 452 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 RAB25P57735 213 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 ZNF45Q02386 682 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 PDZK1IP1Q13113 114 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 UNC119Q13432 240 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 RSU1Q15404 277 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 C2orf76Q3KRA6 126 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 SLC22A6Q4U2R8 563 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 HAGHLQ6PII5 290 aaPredicted RBP7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 FAM131AQ6UXB0 335 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 BAIAP2L2Q6UXY1 529 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 SLC25A26Q70HW3 274 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 OVCH2Q7RTZ1 564 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 LHFPL4Q7Z7J7 247 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 WDR86Q86TI4 376 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 CALHM1Q8IU99 346 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 MKXQ8IYA7 352 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 MFSD4AQ8N468 514 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 OR4M1Q8NGD0 313 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 OR5T2Q8NGG2 359 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 KCNG3Q8TAE7 436 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 PTX4Q96A99 478 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 SEH1LQ96EE3 360 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 TMEM59Q9BXS4 323 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 PKIBQ9C010 78 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 METTL9Q9H1A3 318 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 ING4Q9UNL4 249 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 V9GYH0 126 aa7.73□□□□□ -1.17
SMARCB1-206ENST00000477836 TMEM14DPA8MWL7 114 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 LDLRAD4O15165 306 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 SCGNO76038 276 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 CSTBP04080 98 aaKnown RBP7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 NDUFB7P17568 137 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 AMY2BP19961 511 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 COX7A1P24310 79 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 IL24Q13007 206 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 IL18Q14116 193 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 GPR176Q14439 515 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 TMEM69Q5SWH9 247 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 OR10K2Q6IF99 312 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 C8orf86Q6ZUL3 223 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 SAXO1Q8IYX7 474 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 PXT1Q8NFP0 134 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 OR10K1Q8NGX5 313 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 LRRC29Q8WV35 223 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 SLAMF9Q96A28 289 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 S100A16Q96FQ6 103 aaKnown RBP7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 URM1Q9BTM9 101 aaKnown RBP7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 ATG5Q9H1Y0 275 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 ABCG5Q9H222 651 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 OR51I2Q9H344 312 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 EDA2RQ9HAV5 297 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 PCDHB16Q9NRJ7 776 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 IL36GQ9NZH8 169 aa7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 SLC25A10Q9UBX3 287 aaPredicted RBP7.72□□□□□ -1.17
SMARCB1-206ENST00000477836 A0A0A6YYH2 397 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 IGKV1-12A0A0C4DH73 117 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 METTL21EPA6NDL7 271 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 FABP12A6NFH5 140 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 A6NJ64 397 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 HTR3BO95264 441 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 LY86O95711 162 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 IGKV1D-12P01611 117 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 TFF1P04155 84 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 GTF2F2P13984 249 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 MGMTP16455 207 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 MPZP25189 248 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 MYCNOSP40205 109 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 RPS27AP62979 156 aaKnown RBP7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 QRFPP83859 136 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 PLA2G7Q13093 441 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 MADCAM1Q13477 382 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 ASCL4Q6XD76 172 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 C18orf65Q6ZTR6 163 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM185AQ8N0U4 392 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 TMEM104Q8NE00 496 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 AQP3Q92482 292 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 BORCS5Q969J3 196 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 DUX3Q96PT4 197 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 BANF2Q9H503 90 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 HEXA-AS1Q9H8Q6 139 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 DIABLOQ9NR28 239 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 RABL2AQ9UBK7 228 aaPredicted RBP7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 RAB22AQ9UL26 194 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 ZNF256Q9Y2P7 627 aaPredicted RBP7.71□□□□□ -1.18
SMARCB1-206ENST00000477836 A0A1W2PP11 408 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 NUDT19A8MXV4 375 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 J3QRK9 145 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 LPLP06858 475 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 FRMD6-AS1P0C7T7 363 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 BCL3P20749 454 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 CDK2P24941 298 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 PTBP1P26599 531 aaKnown RBP eCLIP7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 CD40LGP29965 261 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 CEBPDP49716 269 aaPredicted RBP7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 TAS2R20P59543 309 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 GMFBP60983 142 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 PITPNAQ00169 270 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms