RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 IGF1P05019 195 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 IGHV4-30-4P0DP06 118 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 DBTP11182 482 aaKnown RBP9.23□□□□□ -0.93
HDAC6-219ENST00000476625 SERPINA2P20848 420 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 BLVRBP30043 206 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-219ENST00000476625 CCR9P51686 369 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 GTF2A1P52655 376 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-219ENST00000476625 ADARB1P78563 741 aaKnown RBP9.23□□□□□ -0.93
HDAC6-219ENST00000476625 IL13RA2Q14627 380 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 RSU1Q15404 277 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 MMDQ15546 238 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 ECSCRQ19T08 205 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 CT45A1Q5HYN5 189 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 ATAD3CQ5T2N8 411 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 Q8N1Y9 231 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 LINC00311Q8N616 119 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 CT45A3Q8NHU0 189 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 TSEN15Q8WW01 171 aaKnown RBP9.23□□□□□ -0.93
HDAC6-219ENST00000476625 UBE2E2Q96LR5 201 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 GABARAPL3Q9BY60 117 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 NCOR1P1Q9H4R4 102 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 ZMAT4Q9H898 229 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 ING4Q9UNL4 249 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 ST3GAL6Q9Y274 331 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 VSIG4Q9Y279 399 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 SIRT4Q9Y6E7 314 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-219ENST00000476625 ALMS1Q8TCU4 4167 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 SORL1Q92673 2214 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 IGHV7-81A0A0B4J1V7 117 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 TMEM30CPA0ZSE6 113 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 C12orf77C9JDV5 145 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 GYG2O15488 501 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 RAB9AP51151 201 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 RBM11P57052 281 aaKnown RBP9.22□□□□□ -0.93
HDAC6-219ENST00000476625 LSAMPQ13449 338 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 XAF1Q6GPH4 301 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 SLC25A48Q6ZT89 311 aaKnown RBP9.22□□□□□ -0.93
HDAC6-219ENST00000476625 ZNF429Q86V71 674 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 PARP16Q8N5Y8 322 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 CCDC197Q8NCU1 140 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 PXT1Q8NFP0 134 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 OR10A7Q8NGE5 316 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 OR8J1Q8NGP2 316 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 OR4K15Q8NH41 348 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 LGALS12Q96DT0 336 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 ALG8Q9BVK2 526 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 MRPL20Q9BYC9 149 aaKnown RBP9.22□□□□□ -0.93
HDAC6-219ENST00000476625 ANKRD60Q9BZ19 345 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 RHOFQ9HBH0 211 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 TPSG1Q9NRR2 321 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 OAZ3Q9UMX2 235 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 A3GALT2U3KPV4 340 aa9.22□□□□□ -0.93
HDAC6-219ENST00000476625 TRAV41A0A0B4J266 112 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 A0A1W2PN81 502 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 MT-ND4P03905 459 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 CHRNA7P36544 502 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 ACTBP60709 375 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 RUNX1Q01196 453 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 PAX5Q02548 391 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 ZIK1Q3SY52 487 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-219ENST00000476625 ZNF529Q6P280 563 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 ACSM6Q6P461 480 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 TMEM65Q6PI78 240 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 SLC16A12Q6ZSM3 486 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 SERPINA12Q8IW75 414 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 ODF3L1Q8IXM7 274 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 OR13C5Q8NGS8 318 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 OR52N1Q8NH53 320 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 NEK7Q8TDX7 302 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 OR51J1Q9H342 316 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 FAM53CQ9NYF3 392 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 DHDHQ9UQ10 334 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 GAB2Q9UQC2 676 aa9.21□□□□□ -0.94
HDAC6-219ENST00000476625 PLECQ15149 4684 aaKnown RBP9.21□□□□□ -0.94
HDAC6-219ENST00000476625 FAM90A10PA6NDY2 464 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 LINC01619G3V211 115 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 AIPO00170 330 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 HBZP02008 142 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 RCC1P18754 421 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-219ENST00000476625 RAB3AP20336 220 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 IL3RAP26951 378 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 OR3A3P47888 321 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 INSL3P51460 131 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 DEFA5Q01523 94 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 DOC2BQ14184 412 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 LRRC36Q1X8D7 754 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 C19orf54Q5BKX5 351 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 ASCL4Q6XD76 172 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 ZNF497Q6ZNH5 498 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 ZDHHC13Q8IUH4 622 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 OR52L2PQ8NGH6 319 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 OR5D14Q8NGL3 314 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 OR5AK2Q8NH90 309 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 ISOC1Q96CN7 298 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 MS4A10Q96PG2 267 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 FAM103A1Q9BTL3 118 aaKnown RBP9.2□□□□□ -0.94
HDAC6-219ENST00000476625 TOLLIPQ9H0E2 274 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 AMBNQ9NP70 447 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 GNG12Q9UBI6 72 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms