RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 OR10X1Q8NGY0 326 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 OR4K15Q8NH41 348 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 SGCDQ92629 289 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 PHF21AQ96BD5 680 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 RBMXL1Q96E39 390 aaKnown RBP14.69□□□□□ -0.06
COL7A1-209ENST00000474432 Q96M66 194 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 LSM2Q9Y333 95 aaKnown RBP14.69□□□□□ -0.06
COL7A1-209ENST00000474432 IGHV3-72A0A0B4J1Y9 119 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 FAM90A10PA6NDY2 464 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 FAM90A7PA6NKC0 464 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 LINC01548A6NM66 108 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 FAM90A23PA8MXZ1 464 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 CCRL2O00421 344 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 MYL12BO14950 172 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 GAPDHP04406 335 aaKnown RBP14.68□□□□□ -0.06
COL7A1-209ENST00000474432 CDK1P06493 297 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 MGMTP16455 207 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 RCC1P18754 421 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-209ENST00000474432 HES1Q14469 280 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 FAM27D1Q5T7N8 215 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 SYT6Q5T7P8 510 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-209ENST00000474432 AWAT2Q6E213 333 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 NEK7Q8TDX7 302 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 EAF1Q96JC9 268 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-209ENST00000474432 NOL4LQ96MY1 436 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-209ENST00000474432 SELENOIQ9C0D9 397 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 SPACA1Q9HBV2 294 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 PEX16Q9Y5Y5 336 aa14.68□□□□□ -0.06
COL7A1-209ENST00000474432 ZNF736B4DX44 427 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-209ENST00000474432 MCRIP1C9JLW8 97 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 IGHG2P01859 326 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 CD37P11049 281 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 IGLL1P15814 213 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 ZNF137PP52743 207 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 Q3ZCU0 254 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 CT45A1Q5HYN5 189 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 SLC25A48Q6ZT89 311 aaKnown RBP14.67□□□□□ -0.06
COL7A1-209ENST00000474432 MOB3BQ86TA1 216 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 ZNF329Q86UD4 541 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 LRRTM1Q86UE6 522 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 IZUMO1Q8IYV9 350 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 OR4X2Q8NGF9 303 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 OR1L1Q8NH94 360 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 CT45A3Q8NHU0 189 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 RTN4IP1Q8WWV3 396 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-209ENST00000474432 UQCC2Q9BRT2 126 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 PLSCR3Q9NRY6 295 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 ETAA1Q9NY74 926 aa14.67□□□□□ -0.06
COL7A1-209ENST00000474432 PSMB11A5LHX3 300 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 HBZP02008 142 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 IRF3Q14653 427 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 ACSM3Q53FZ2 586 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 C6orf141Q5SZD1 244 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 FOXB2Q5VYV0 432 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 ETV3LQ6ZN32 361 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 NKAIN3Q8N8D7 197 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 NRG4Q8WWG1 115 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 MBNL3Q9NUK0 354 aaKnown RBP14.66□□□□□ -0.06
COL7A1-209ENST00000474432 AURKAIP1Q9NWT8 199 aaPredicted RBP14.66□□□□□ -0.06
COL7A1-209ENST00000474432 LINC00527Q9UJ94 153 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 TRAPPC2LQ9UL33 140 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 ERGIC3Q9Y282 383 aa14.66□□□□□ -0.06
COL7A1-209ENST00000474432 UBE2QL1A1L167 161 aa14.65□□□□□ -0.06
COL7A1-209ENST00000474432 CRTAPO75718 401 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-209ENST00000474432 GLAP06280 429 aa14.65□□□□□ -0.06
COL7A1-209ENST00000474432 FUT3P21217 361 aa14.65□□□□□ -0.06
COL7A1-209ENST00000474432 C1orf100Q5SVJ3 147 aa14.65□□□□□ -0.06
COL7A1-209ENST00000474432 C18orf65Q6ZTR6 163 aa14.65□□□□□ -0.06
COL7A1-209ENST00000474432 REC114Q7Z4M0 266 aa14.65□□□□□ -0.06
COL7A1-209ENST00000474432 Q8N9W7 124 aa14.65□□□□□ -0.06
COL7A1-209ENST00000474432 NECAP2Q9NVZ3 263 aa14.65□□□□□ -0.06
COL7A1-209ENST00000474432 PTGES3LE9PB15 166 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 CA11O75493 328 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 PF4V1P10720 104 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 CD33P20138 364 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 CD1BP29016 333 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 OR10K2Q6IF99 312 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 OR10V1Q8NGI7 309 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 MRPL30Q8TCC3 161 aaKnown RBP14.64□□□□□ -0.07
COL7A1-209ENST00000474432 FAM46BQ96A09 425 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 DCLRE1BQ9H816 532 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 TAF9BQ9HBM6 251 aa14.64□□□□□ -0.07
COL7A1-209ENST00000474432 H0YHG0 523 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 PDCD6O75340 191 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 VSIG8P0DPA2 414 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 MAPK3P27361 379 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-209ENST00000474432 SLC35A2P78381 396 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 GABPB1Q06547 395 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-209ENST00000474432 GNMTQ14749 295 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 SPHARQ15513 63 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 TMEM30BQ3MIR4 351 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 C6orf183Q5T699 404 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 SLC35E3Q7Z769 313 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 TGIF2LXQ8IUE1 241 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 MS4A15Q8N5U1 240 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 LINC00482Q8N8I6 264 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 OR2T10Q8NGZ9 312 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 CHPT1Q8WUD6 406 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 THRSPQ92748 146 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 MND1Q9BWT6 205 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms