RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ZDHHC23Q8IYP9 409 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 CLEC18CQ8NCF0 446 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 MRPL30Q8TCC3 161 aaKnown RBP9.33□□□□□ -0.92
C9orf3-214ENST00000473778 OR51B6Q9H340 312 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 PLEKHF2Q9H8W4 249 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 LIPGQ9Y5X9 500 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 NCOR1O75376 2440 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 TRAV39A0A0B4J263 110 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 TRAV24A0A0B4J272 114 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 ZNF727A8MUV8 499 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 HS3ST1O14792 307 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 RHBDL1O75783 438 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 HIST1H1BP16401 226 aaKnown RBP9.32□□□□□ -0.92
C9orf3-214ENST00000473778 PLA2G5P39877 138 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 MAGEA5P43359 124 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 ZNF266Q14584 549 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 Q6ZRM9 215 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM185AQ8N0U4 392 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 KDF1Q8NAX2 398 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-214ENST00000473778 SUMF2Q8NBJ7 301 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 RDH5Q92781 318 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 MISP3Q96FF7 219 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 THOC3Q96J01 351 aaKnown RBP9.32□□□□□ -0.92
C9orf3-214ENST00000473778 MRPS18CQ9Y3D5 142 aaKnown RBP9.32□□□□□ -0.92
C9orf3-214ENST00000473778 ATP23Q9Y6H3 246 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 KNTC1P50748 2209 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 A0A1B0GW64 132 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 A0A1W2PNU3 283 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A10PA6NDY2 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A18PA6NE21 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A16PA6NEW6 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 RBFOX3A6NFN3 312 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A20PA6NIJ5 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A8PA6NJQ4 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A7PA6NKC0 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM166BA8MTA8 275 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A22PA8MWA6 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 KIAA1324LA8MWY0 1029 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A12PA8MX19 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A5PA8MXJ8 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A23PA8MXZ1 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 H0YL77 283 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 PGLYRP1O75594 196 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-214ENST00000473778 YIF1AO95070 293 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 IGLV2-14P01704 120 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 SERPINA7P05543 415 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A15PP0C7V4 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A13PP0C7W8 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A14PP0C7W9 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 FAM90A24PP0C7X0 464 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 HOXA5P20719 270 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 VDAC1P21796 283 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 PKIAP61925 76 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 RHEBQ15382 184 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 NRN1LQ496H8 165 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 DCAF12Q5T6F0 453 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 UNQ6494/PRO21346Q6UXR6 183 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 MRPL21Q7Z2W9 205 aaKnown RBP9.32□□□□□ -0.92
C9orf3-214ENST00000473778 OR2M7Q8NG81 312 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 OR1J1Q8NGS3 322 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 NEK7Q8TDX7 302 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 POM121L2Q96KW2 1035 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 LOXL2Q9Y4K0 774 aa9.32□□□□□ -0.92
C9orf3-214ENST00000473778 TSTD3H0UI37 97 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 IFNA17P01571 189 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 IGKV1-39P01597 117 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 IGKV1D-39P04432 117 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 WNT5AP41221 380 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 CDX1P47902 265 aaPredicted RBP9.31□□□□□ -0.92
C9orf3-214ENST00000473778 SRPXP78539 464 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 SSPNQ14714 243 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 SOHLH1Q5JUK2 328 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 ZNF324BQ6AW86 544 aaPredicted RBP9.31□□□□□ -0.92
C9orf3-214ENST00000473778 VASH2Q86V25 355 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 OR51H1Q8NH63 302 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 MALSU1Q96EH3 234 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 PBDC1Q9BVG4 233 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 FAM86C1Q9NVL1 165 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 GAR1Q9NY12 217 aaKnown RBP9.31□□□□□ -0.92
C9orf3-214ENST00000473778 OR1A1Q9P1Q5 309 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 TP53TG5Q9Y2B4 290 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 TECTAO75443 2155 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 PRR14LQ5THK1 2151 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 CD300LBA8K4G0 201 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 B4E171 279 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 SRP19P09132 144 aaKnown RBP9.31□□□□□ -0.92
C9orf3-214ENST00000473778 PSG2P11465 335 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 TSPAN7P41732 249 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 CEBPGP53567 150 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 RAB1AP62820 205 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 ICAM4Q14773 271 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 SRSF7Q16629 238 aaKnown RBP eCLIP9.31□□□□□ -0.92
C9orf3-214ENST00000473778 HIKESHIQ53FT3 197 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 ALKBH2Q6NS38 261 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 ZNF343Q6P1L6 599 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 CYB561D1Q8N8Q1 229 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 UBALD1Q8TB05 177 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 LINC00470Q9BZP3 86 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 PLA2G3Q9NZ20 509 aa9.31□□□□□ -0.92
C9orf3-214ENST00000473778 BOD1L1Q8NFC6 3051 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms