RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CIB3Q96Q77 187 aaPredicted RBP5.26□□□□□ -1.57
HERC4-209ENST00000473533 PYGO2Q9BRQ0 406 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 OR51I2Q9H344 312 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 PRDM13Q9H4Q3 707 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 LAMP3Q9UQV4 416 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 TP53TG5Q9Y2B4 290 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 RNF115Q9Y4L5 304 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 MPC1Q9Y5U8 109 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 GVINP1Q7Z2Y8 2422 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 FAM221AA4D161 298 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 C5orf63A6NC05 138 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ST8SIA5O15466 376 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 CD99P14209 185 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 HOXA6P31267 233 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ARR3P36575 388 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 LCN2P80188 198 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 BSXQ3C1V8 233 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 SPNS3Q6ZMD2 512 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 CISD2Q8N5K1 135 aaKnown RBP5.25□□□□□ -1.57
HERC4-209ENST00000473533 DEFB119Q8N690 84 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ZNF709Q8N972 641 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 OR10V1Q8NGI7 309 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 FRZBQ92765 325 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 LHX4Q969G2 390 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 C14orf144Q96I85 54 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 PKIBQ9C010 78 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 WNT5BQ9H1J7 359 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 GPR35Q9HC97 309 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 PRSS50Q9UI38 385 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 COL6A3P12111 3177 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 TRBV23-1A0A0A0MS06 115 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 IGHV1-45A0A0A0MS14 117 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 A0A0J9YW62 118 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 CTXND1A0A1B0GTU2 59 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ANKRD30BLA7E2S9 258 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ZIC3O60481 467 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ZNF737O75373 536 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 HRASP01112 189 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 SERPINA7P05543 415 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 RAB4AP20338 218 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 MEF2BQ02080 365 aaPredicted RBP5.25□□□□□ -1.57
HERC4-209ENST00000473533 PLP2Q04941 152 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 PRDX4Q13162 271 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 CEACAM16Q2WEN9 425 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ZNF343Q6P1L6 599 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 FIP1L1Q6UN15 594 aaKnown RBP5.25□□□□□ -1.57
HERC4-209ENST00000473533 CA5BP1Q8WTZ4 195 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 JSRP1Q96MG2 331 aaPredicted RBP5.25□□□□□ -1.57
HERC4-209ENST00000473533 IMMP2LQ96T52 175 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 CCL28Q9NRJ3 127 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 IFITM10A6NMD0 228 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 SYNGR4O95473 234 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 SOD3P08294 240 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 GLI4P10075 376 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ASCL1P50553 236 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 IDH3GP51553 393 aaPredicted RBP5.25□□□□□ -1.57
HERC4-209ENST00000473533 MLF1P58340 268 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ADIRFQ15847 76 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 COLCA1Q6ZS62 124 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 SLC25A45Q8N413 288 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 ZNF525Q8N782 197 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 PLPPR1Q8TBJ4 325 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 GPR146Q96CH1 333 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 UCN2Q96RP3 112 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 HIST1H2BLQ99880 126 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 WDR61Q9GZS3 305 aaKnown RBP5.25□□□□□ -1.57
HERC4-209ENST00000473533 TMEM9BQ9NQ34 198 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 RPRMQ9NS64 109 aa5.25□□□□□ -1.57
HERC4-209ENST00000473533 RBM7Q9Y580 266 aaKnown RBP5.25□□□□□ -1.57
HERC4-209ENST00000473533 ADAMTS20P59510 1910 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 IGHV3-15A0A0B4J1V0 119 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 J3QW42 95 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 M0QZK8 103 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 GGCTO75223 188 aaKnown RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 B4GALT1P15291 398 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 COX5AP20674 150 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 GALR1P47211 349 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 DUSP3P51452 185 aaPredicted RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 SPCS3P61009 180 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 RUNX1Q01196 453 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 CATR1Q13166 79 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 GAMTQ14353 236 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 BEND4Q6ZU67 534 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 CENPVQ7Z7K6 275 aaPredicted RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 TMEM170AQ8WVE7 144 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 DYRK2Q92630 601 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 CCDC74BQ96LY2 380 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 NDUFAF3Q9BU61 184 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 TMEM147Q9BVK8 224 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 SH2D2AQ9NP31 389 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 TAAR3PQ9P1P4 343 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 HS3ST3B1Q9Y662 390 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 SHISA7A6NL88 538 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 ZNF716A6NP11 495 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 CYTIPO60759 359 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 TYMSP04818 313 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 BCL3P20749 454 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 EPHA1P21709 976 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 IL2RGP31785 369 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 FOLR3P41439 243 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms